External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Long non-coding RNA CARDINAL regulates vascular smooth muscle cell phenotype ... GSE268859 Homo sapiens	6 samples	counts_table 833 KB	Not in ASAP	Details
geo bulk	Lenvatinib-treated Tregs exhibit superior anti-inflammation effect in autoimm... GSE328467 Mus musculus	6 samples	counts_table 834 KB	Not in ASAP	Details
geo bulk	A mycovirus from entomogenous fungi Beauveria acts as a mobile effector of ph... GSE336010 Sclerotinia sclerotiorum	6 samples	counts_table 835 KB	Not in ASAP	Details
geo bulk	Blocking the Gut–Liver IgA Axis Attenuates Macrophage-Mediated Inflammation a... GSE320339 Homo sapiens	6 samples	counts_table 835 KB	Not in ASAP	Details
geo bulk	Differential Expression of LncRNAs in Diabetic Corneal Neuropathy and Its Imp... GSE329119 Mus musculus	6 samples	counts_table 837 KB	Not in ASAP	Details
geo bulk	Functional characterization of the orphan hypothetical protein TGGT1_245740, ... GSE334992 Toxoplasma gondii	6 samples	counts_table 838 KB	Not in ASAP	Details
geo bulk	Bulk RNA-seq profiling of mouse livers with Themis ablation under MASH diet f... GSE300143 Mus musculus	6 samples	counts_table 839 KB	Not in ASAP	Details
geo bulk	Largely distinct post-translational modifications differentiate skeletal musc... GSE296017 Mus musculus	6 samples	counts_table 840 KB	Not in ASAP	Details
geo bulk	Loss of ATP-dependent citrate lyase Drives Left Ventricular Dysfunction by Me... GSE243350 Mus musculus	6 samples	archive_table 840 KB	Not in ASAP	Details
geo bulk	Proteasome alteration between epithelial and hematopoietic cells facilitates ... GSE319325 Mus musculus	6 samples	counts_table 841 KB	Not in ASAP	Details
geo bulk	EZH2 inhibition reshapes 3D chromatin architecture to induce immunogenic phen... GSE329205 Homo sapiens	6 samples	counts_table 842 KB	Not in ASAP	Details
geo bulk	Lenvatinib-treated Tregs exhibit superior anti-inflammation effect in autoimm... GSE328751 Mus musculus	6 samples	counts_table 846 KB	Not in ASAP	Details
geo bulk	Comparative transcriptomic profiling of TRI-LC21 and BEAS-2B cells to investi... GSE328872 Homo sapiens	6 samples	counts_table 848 KB	Not in ASAP	Details
geo bulk	Endogenous retroviruses synthesize heterologous chimeric RNAs to reinforce hu... GSE267564 Homo sapiens	6 samples	counts_table 848 KB	Not in ASAP	Details
geo bulk	Depletion of lamin-associated polypeptide 2 alpha leads to chromatin reorgani... GSE292286 Mus musculus	6 samples	archive_table 850 KB	Not in ASAP	Details
geo bulk	Increased susceptibility to 4-HNE-induced toxicity and impaired development i... GSE314834 Homo sapiens	6 samples	counts_table 856 KB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of YBX1 knockdown in human nucleus pulposus cells GSE344516 Homo sapiens	6 samples	counts_table 858 KB	Not in ASAP	Details
geo bulk	A germline-encoded lncRNA-mitochondrial axis rewires oxidative phosphorylatio... GSE342052 Homo sapiens	6 samples	counts_table 858 KB	Not in ASAP	Details
geo bulk	Transcription co-repressors Panky and Panky-like are essential for retinal co... GSE314562 Mus musculus	6 samples	archive_table 860 KB	Not in ASAP	Details
geo bulk	The mRNA profile of HT29 cells after treatment with YM155 GSE298631 Homo sapiens	6 samples	archive_table 860 KB	Not in ASAP	Details
geo bulk	RNA Sequencing of S. aureus infected nmr-2(ok3324) and wild type (WT) N2 C. ... GSE261802 Caenorhabditis elegans	6 samples	archive_table 860 KB	Not in ASAP	Details
geo bulk	RNA Sequencing of nmr-2(ok3324) and wild type (WT) N2 C. elegans GSE261728 Caenorhabditis elegans	6 samples	archive_table 860 KB	Not in ASAP	Details
geo bulk	CMPortal: a community-oriented, data-driven resource to inform protocol desig... GSE298573 Homo sapiens	6 samples	archive_table 860 KB	Not in ASAP	Details
geo bulk	Evaluation of KDAC6 (HDAC6) inhibitor selectivity in HT1080 cells GSE302384 Homo sapiens	6 samples	counts_table 864 KB	Not in ASAP	Details
geo bulk	RNA-seq data of virtual memory T cells In vitro induced from WT and DUSP2-/-... GSE329037 Mus musculus	6 samples	counts_table 865 KB	Not in ASAP	Details