External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	MAD2L1 supports MYC-driven liver carcinogenesis in mice and predicts poor pro... GSE274182 Homo sapiens	6 samples	counts_table 1.46 MB	Not in ASAP	Details
geo bulk	Neutrophil nucleolar stress rapidly releases nucleoli-stored IFNα during infe... GSE330411 Mus musculus	6 samples	counts_table 1.47 MB	Not in ASAP	Details
geo bulk	In vivo screen for osteoclast derived osteogenic factors using non-resorptive... GSE308663 Danio rerio	6 samples	archive_table 1.47 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of TREM2⁺ and TREM2⁻ TAMs in mouse HCC [RNA-seq] GSE313559 Mus musculus	6 samples	counts_table 1.48 MB	Not in ASAP	Details
geo bulk	Splicing Isoforms Associated to TGFβ-Induced Myofibroblast Activation GSE313078 Homo sapiens	6 samples	counts_table 1.48 MB	Not in ASAP	Details
geo bulk	Targeting Menin in T-Lineage Acute Lymphoblastic Leukemia [menin_treatments] GSE300111 Homo sapiens	6 samples	archive_table 1.49 MB	Not in ASAP	Details
geo bulk	Metabolic licensing of quiescent glioblastoma activation and immune evasion v... GSE316867 Homo sapiens	6 samples	archive_table 1.49 MB	Not in ASAP	Details
geo bulk	RNA-seq profiling of SEM B-ALL cells silenced for KMT2A::AFF1 fusion circular... GSE304109 Homo sapiens	6 samples	archive_table 1.5 MB	Not in ASAP	Details
geo bulk	MBNL1-dependent alternative splicing of NUMA1 shapes neuronal identity during... GSE317293 Homo sapiens	6 samples	counts_table 1.52 MB	Not in ASAP	Details
geo bulk	RNA-seq profiling of C2C12 lung cancer-related fatigue cellular models treate... GSE337532 Mus musculus	6 samples	counts_table 1.52 MB	Not in ASAP	Details
geo bulk	RNA exonuclease REXO4 resolves m6A-marked R-loops and suppresses anti-tumor i... GSE313849 Homo sapiens	6 samples	archive_table 1.52 MB	Not in ASAP	Details
geo bulk	Herpesvirus-encoded lncRNA targets host splicing by sequestering splicing fac... GSE311068 Homo sapiens	6 samples	counts_table 1.54 MB	Not in ASAP	Details
geo bulk	Effect of intravenous poly(lactide-co-glycolide) nanoparticles on M2-polarize... GSE336549 Mus musculus	6 samples	counts_table 1.54 MB	Not in ASAP	Details
geo bulk	RNA sequencing of aortic tissues from Prdm16 smooth muscle-specific KO and co... GSE227692 Mus musculus	6 samples	counts_table 1.55 MB	Not in ASAP	Details
geo bulk	RNA-seq profiling of U-2 OS osteosarcoma cells expressing scrambled control o... GSE339246 Homo sapiens	6 samples	counts_table 1.55 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of diabetic wound tissues treated with multifunction... GSE342853 Rattus norvegicus	6 samples	counts_table 1.56 MB	Not in ASAP	Details
geo bulk	NAT10 Promotes Tubular Epithelial Cell Senescence in Cisplatin-Induced Acute ... GSE315580 Homo sapiens	6 samples	counts_table 1.56 MB	Not in ASAP	Details
geo bulk	Serum Amyloid A (SAA) Transcriptomics Sequencing on enteroid GSE306974 Homo sapiens	6 samples	archive_table 1.56 MB	Not in ASAP	Details
geo bulk	An Engineered Viral RNA Degrader on Mitochondrial Surface that Mitigates RNA ... GSE322538 Homo sapiens	6 samples	counts_table 1.57 MB	Not in ASAP	Details
geo bulk	An Engineered Viral RNA Degrader on Mitochondrial Surface that Mitigates RNA ... GSE321673 Homo sapiens	6 samples	counts_table 1.58 MB	Not in ASAP	Details
geo bulk	Methyglyoxal reshapes the transcriptional network of human retinal endothelia... GSE263471 Homo sapiens	6 samples	archive_table 1.6 MB	Not in ASAP	Details
geo bulk	Trem2 activation by renal tubular debris sustains Arg1+ macrophage survival a... GSE306859 Mus musculus	6 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	IL7R depletion mitigates neuroinflammation and ischemic stroke via AKT dephos... GSE313837 Mus musculus	6 samples	counts_table 1.61 MB	Not in ASAP	Details
geo bulk	Osteocytes produce erythroferrone to regulate liver hepcidin during stress er... GSE241575 Mus musculus	6 samples	counts_table 1.61 MB	Not in ASAP	Details
geo bulk	Isoform-Specific Splicing of ANK2 by PTBP2 Orchestrates Retinal Pigment Epith... GSE302130 Homo sapiens	6 samples	counts_table 1.61 MB	Not in ASAP	Details