External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptomic profiling of NNMT knockdown in MKN-45 gastric cancer cells GSE315562 Homo sapiens	6 samples	counts_table 5.42 MB	Not in ASAP	Details
geo bulk	RNA-seq of EONPs-treated BMDM cells GSE296657 Mus musculus	6 samples	counts_table 5.42 MB	Not in ASAP	Details
geo bulk	The deubiquitinase OTULIN regulates tau expression in neurons GSE294134 Homo sapiens	6 samples	counts_table 5.44 MB	Not in ASAP	Details
geo bulk	NSUN2 rewires metabolism to support protein secretion and enhance bioproducti... GSE299755 Homo sapiens	6 samples	archive_table 5.45 MB	Not in ASAP	Details
geo bulk	Recurrent oncogenic ZC3H18 mutations stabilize endogenous retroviral RNA [zfm... GSE271491 Danio rerio	6 samples	archive_table 5.45 MB	Not in ASAP	Details
geo bulk	XG knockout and transcriptome perturbations in Ewing's sarcoma cell line TC-71 GSE230734 Homo sapiens	6 samples	counts_table 5.48 MB	Not in ASAP	Details
geo bulk	Transcriptome alterations after CUL4A knockdown in HT-29 cells GSE299400 Homo sapiens	6 samples	counts_table 5.52 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of mouse subgranular zone-derived neural stem cells ... GSE328645 Mus musculus	6 samples	counts_table 5.52 MB	Not in ASAP	Details
geo bulk	NAT10-mediated N4-acetylcytidine modification drives RNA splicing of PML to a... GSE326590 Homo sapiens	6 samples	counts_table 5.54 MB	Not in ASAP	Details
geo bulk	P7C3 targets eIF4A1 to alleviate hepatic fibrosis by inhibiting protein trans... GSE316758 Homo sapiens	6 samples	counts_table 5.57 MB	Not in ASAP	Details
geo bulk	RNA-Seq analysis of roots of Axonopus compressus in response to aluminum toxi... GSE254750 Axonopus compressus	6 samples	counts_table 5.57 MB	Not in ASAP	Details
geo bulk	INHBA activated PI3K/AKT pathway in gastric cancer cell line MKN45 GSE277561 Homo sapiens	6 samples	counts_table 5.73 MB	Not in ASAP	Details
geo bulk	Vascular smooth muscle cell state trajectories mediate molecular mechanisms o... GSE316714 Homo sapiens	6 samples	counts_table 5.79 MB	Not in ASAP	Details
geo bulk	Effect of GnRH administration on gene expression of obese mice neural stem cells GSE275318 Mus musculus	6 samples	counts_table 5.81 MB	Not in ASAP	Details
geo bulk	Tectochrysin alleviates Ang II-induced pathological cardiac hypertrophy by bi... GSE327509 Mus musculus	6 samples	counts_table 5.82 MB	Not in ASAP	Details
geo bulk	Effect of Kdm4a knockdown (KD) on gene expression in mosue PTR NEPC cells der... GSE227717 Mus musculus	6 samples	archive_table 5.87 MB	Not in ASAP	Details
geo bulk	Phosphoethanolamine Cytidylyltransferase 2 Integrates DAG Metabolism and TBK1... GSE324604 Mus musculus	6 samples	counts_table 5.92 MB	Not in ASAP	Details
geo bulk	A Novel Therapeutic Agent: Harnessing Macrophage Polarization to Combat Sepsi... GSE296887 Mus musculus	6 samples	counts_table 5.95 MB	Not in ASAP	Details
geo bulk	B Cell-Intrinsic Type I Interferon Signaling Contributes to Defective Vaccine... GSE304899 Mus musculus	6 samples	archive_table 5.96 MB	Not in ASAP	Details
geo bulk	CBX4 Facilitates the Development of Acute Monocytic Leukemia by Recruiting HD... GSE279199 Danio rerio	6 samples	archive_table 6 MB	Not in ASAP	Details
geo bulk	RNA-seq of bone marrow-derived macrophages(BMDMs) coclutured with mEC25 cance... GSE274929 Mus musculus	6 samples	counts_table 6.06 MB	Not in ASAP	Details
geo bulk	PABPC1-induced stabilization of PGK1 mRNA reduces apoptosis and sunitinib sen... GSE314693 Homo sapiens	6 samples	counts_table 6.09 MB	Not in ASAP	Details
geo bulk	DYRK1A enhances antitumor immunity in type 1 conventional dendritic cells via... GSE281370 Mus musculus	6 samples	counts_table 6.13 MB	Not in ASAP	Details
geo bulk	PTMA Safeguards Mitochondrial Integrity to Sustain Metabolic Function and Ant... GSE307982 Mus musculus	6 samples	counts_table 6.22 MB	Not in ASAP	Details
geo bulk	Aging-induced Suppression of Cirbp Compromises DHODH-Mediated Ferroptosis Def... GSE227004 Rattus norvegicus	6 samples	counts_table 6.46 MB	Not in ASAP	Details