External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Transcriptome analysis of cisplatin-treated KGN human ovarian granulosa cells GSE304834 Homo sapiens	6 samples	counts_table 11.2 MB	Not in ASAP	Details
geo bulk	Impact of Ethylparaben on transcriptome of early mouse embryo GSE282961 Mus musculus	6 samples	archive_table 11.2 MB	Not in ASAP	Details
geo bulk	A Genome-Wide CRISPR Screen Identifies DTX4 Modulating Alveolar Macrophage Ch... GSE299693 Homo sapiens	6 samples	counts_table 11.5 MB	Not in ASAP	Details
geo bulk	CHTOP Regulates ROS Homeostasis to Modulate Chemoresistance in Colorectal Cancer GSE313017 Homo sapiens	6 samples	counts_table 11.5 MB	Not in ASAP	Details
geo bulk	Preserved magnitude and breadth of T cell immunity to SARS-CoV-2 mRNA vaccina... GSE314223 Homo sapiens	6 samples	archive_table 11.8 MB	Not in ASAP	Details
geo bulk	PD-L1 drives metabolic reprogramming and mitochondrial remodeling in NSCLC cells GSE330687 Homo sapiens	6 samples	counts_table 12.1 MB	Not in ASAP	Details
geo bulk	Comparative transcriptome dynamics between the dormant and actively growing b... GSE343664 Toona sinensis	6 samples	counts_table 12.2 MB	Not in ASAP	Details
geo bulk	A Genome-Wide CRISPR Screen Identifies DTX4 Modulating Alveolar Macrophage Ch... GSE299689 Homo sapiens	6 samples	counts_table 12.5 MB	Not in ASAP	Details
geo bulk	The Role of Transforming Growth Factor Alpha in Mediating the Malignant Trans... GSE308612 Homo sapiens	6 samples	counts_table 13.2 MB	Not in ASAP	Details
geo bulk	AURKA/PHB2 signaling drives acquired resistance to KRAS G12C inhibitors in KR... GSE316749 Homo sapiens	6 samples	archive_table 13.2 MB	Not in ASAP	Details
geo bulk	Expression and Functional Role of NAD(P)H:quinone Oxidoreductase 1 (NQO1) in ... GSE331155 Homo sapiens	6 samples	counts_table 13.2 MB	Not in ASAP	Details
geo bulk	Rifamycin O as a Novel CRBN Ligand for Targeted Degradation of IKZF1/3 Protei... GSE297439 Homo sapiens	6 samples	counts_table 13.3 MB	Not in ASAP	Details
geo bulk	Effect of HNF1A-MODY in glucagon expressing cells in the duodenal intestine [... GSE311839 Mus musculus	6 samples	archive_table 13.4 MB	Not in ASAP	Details
geo bulk	Cetylpyridinium chloride exposure contributes to apoptosis and follicular atr... GSE271381 Mus musculus	6 samples	archive_table 13.5 MB	Not in ASAP	Details
geo bulk	Expression profiling by high throughput sequencing of Myosin VI GSE300165 Homo sapiens	6 samples	archive_table 13.6 MB	Not in ASAP	Details
geo bulk	AtNUDT11 mediated dpCoA-RNA-seq defines epitranscriptomicdpCoA capped RNA [dp... GSE302462 Arabidopsis thaliana	6 samples	archive_table 14 MB	Not in ASAP	Details
geo bulk	Defining Chicken Host Responses to Spotty Liver Disease GSE325026 Gallus gallus	6 samples	archive_table 14 MB	Not in ASAP	Details
geo bulk	Defining molecular signatures of the solid/pseudopapillary and pseudoglandula... GSE319935 Homo sapiens	6 samples	archive_table 14.1 MB	Not in ASAP	Details
geo bulk	Exercise-induced renal tubular Cdo1 protects against diabetic nephropathy GSE334164 Mus musculus	6 samples	counts_table 14.2 MB	Not in ASAP	Details
geo bulk	THBS1 Induces Dysfunction of Ovarian Granulosa Cells in Patients with Polycys... GSE330821 Homo sapiens	6 samples	counts_table 14.3 MB	Not in ASAP	Details
geo bulk	Knockdown of Histone H1.5 leads to a loss in centromeric transcription GSE242112 Homo sapiens	6 samples	archive_table 14.5 MB	Not in ASAP	Details
geo bulk	Synthesis, structure-activity relationships, antitumor activities and mechani... GSE320257 Homo sapiens	6 samples	archive_table 14.5 MB	Not in ASAP	Details
geo bulk	Functional characterisation of tumour suppressor PDCD4 reveals a previously u... GSE272498 Homo sapiens	6 samples	archive_table 15 MB	Not in ASAP	Details
geo bulk	Transcriptional profiling of 3 dpf and 5 dpf WT zebrafish intestinal epitheli... GSE341768 Danio rerio	6 samples	archive_table 16.4 MB	Not in ASAP	Details
geo bulk	Transcriptonal profiling of 5 dpf pdcd7/cx20 pd1215 zebrafish mutants and WT... GSE341872 Danio rerio	6 samples	archive_table 16.4 MB	Not in ASAP	Details