External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Targeting Ccr1, Ccr3, Ccr2 and Ccr5 in H3.1K27 Mutant Diffuse Midline Gliomas... GSE301118 Mus musculus	6 samples	archive_table 732 MB	Not in ASAP	Details
geo bulk	PPARG governs adipogenic differentiation and cell state plasticity in well-di... GSE322609 Homo sapiens	6 samples	archive_table 756 MB	Not in ASAP	Details
geo bulk	Identification of a human hematopoietic stem cell subset that retains memory ... GSE318050 Homo sapiens	6 samples	archive_table 762 MB	Not in ASAP	Details
geo bulk	Stress accelerates hepatocellular carcinoma progression via a gut microbial-m... GSE330363 Mus musculus	6 samples	archive_table 787 MB	Not in ASAP	Details
geo bulk	TT-seq analysis in primary neuroblastoma tumor cells. GSE333428 Mus musculus	6 samples	archive_table 789 MB	Not in ASAP	Details
geo bulk	Induction of antigen-presenting monocyte-derived dendritic cells by nanoparti... GSE302362 Mus musculus	6 samples	archive_table 791 MB	Not in ASAP	Details
geo bulk	Single nuceli RNA sequencing of pancreatic tumors to determine how SCAP loss ... GSE317919 Mus musculus	6 samples	archive_table 849 MB	Not in ASAP	Details
geo bulk	Meteorin-like regulates cardiac repair via macrophage modulation following my... GSE335342 Mus musculus	6 samples	counts_table 866 MB	Not in ASAP	Details
geo bulk	HIV-1 Tat protein exposure alters the morphological characteristics and gene ... GSE307481 Homo sapiens	6 samples	archive_table 885 MB	Not in ASAP	Details
geo bulk	Acquired genetic and cell state changes in IDH-mutant glioma progression [org... GSE324860 Homo sapiens	6 samples	archive_table 903 MB	Not in ASAP	Details
geo bulk	Scalable Generation of Hematopoietic Stem Cells Engineered Off-the-Shelf Mono... GSE301248 Homo sapiens	6 samples	archive_table 939 MB	Not in ASAP	Details
geo bulk	Intra-tumoral microbiota and host genotype cooperatively shape neutrophil ant... GSE311000 Homo sapiens	6 samples	archive_table 950 MB	Not in ASAP	Details
geo bulk	Pericytes are organ-specific regulators of tissue morphogenesis GSE285933 Mus musculus	6 samples	archive_table 965 MB	Not in ASAP	Details
geo bulk	Retinoic Acid-Mediated Signaling Regulates Allantoic and Fetoplacental Vascul... GSE304388 Mus musculus	6 samples	archive_table 967 MB	Not in ASAP	Details
geo bulk	Distal regulatory elements required for cell-type-specific expression of Cebp... GSE266211 Mus musculus	6 samples	archive_table 1000 MB	Not in ASAP	Details
geo bulk	mregDCs induce abnormal T cell functions in endometriosis GSE262645 Homo sapiens	6 samples	archive_table 1000 MB	Not in ASAP	Details
geo bulk	Cholesterol-mediated Lysosomal Dysfunction in APOE4 Astrocytes Promotes α-Syn... GSE342463 Homo sapiens	6 samples	archive_table 1020 MB	Not in ASAP	Details
geo bulk	Local glycan engineering induces systemic antitumor immune reactions via anti... GSE292054 Mus musculus	6 samples	archive_table 1.03 GB	Not in ASAP	Details
geo bulk	Periodontitis induces skeletal muscle atrophy by increasing circulating level... GSE315263 Mus musculus	6 samples	archive_table 1.03 GB	Not in ASAP	Details
geo bulk	Antigen-specific immunotherapy with a CD4 hybrid insulin peptide neoepitope a... GSE299087 Mus musculus	6 samples	archive_table 1.03 GB	Not in ASAP	Details
geo bulk	Identification of species differences in structure and function of COMMD3-BMI... GSE320006 Homo sapiens; Mus musculus	6 samples	archive_table 1.04 GB	Not in ASAP	Details
geo bulk	Stem Cells in Muscle Contractures of Children with Cerebral Palsy have Decrea... GSE309114 Homo sapiens	6 samples	archive_table 1.11 GB	Not in ASAP	Details
geo bulk	RNA-seq analysis in primary neuroblastoma tumor cells. GSE333425 Mus musculus	6 samples	archive_table 1.15 GB	Not in ASAP	Details
geo bulk	Decipherin molecular cues from nephronopthisis using kidney organoids derive... GSE306868 Homo sapiens	6 samples	archive_table 1.19 GB	Not in ASAP	Details
geo bulk	Transcriptomic atlas of POSA mice versus normoxic controls GSE319173 Mus musculus	6 samples	archive_table 1.2 GB	Not in ASAP	Details