External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Lateral plate mesoderm directs human amnion and ventral skin organoid formation GSE303380 Homo sapiens	7 samples	archive_table 166 MB	Not in ASAP	Details
geo bulk	Engineered cytokine-secreting cells to prevent foreign body response against ... GSE294864 Mus musculus	7 samples	archive_table 177 MB	Not in ASAP	Details
geo bulk	Transcriptional changes in brain leukocytes after myocardial infarction GSE329761 Mus musculus	7 samples	archive_table 185 MB	Not in ASAP	Details
geo bulk	Sex-Based Differences in Cell Types and Gene Expression within the Anterior C... GSE283098 Homo sapiens	7 samples	archive_table 249 MB	Not in ASAP	Details
geo bulk	Midgut cell atlas of four important mosquito species and the key factors asso... GSE301762 Aedes albopictus; Culex tritaeniorhynchus; Aedes aegypti; Culex pipiens pallens	7 samples	archive_table 281 MB	Not in ASAP	Details
geo bulk	microRNA-25 drives initial resistance to immune checkpoint therapy by repress... GSE313004 Mus musculus	7 samples	archive_table 282 MB	Not in ASAP	Details
geo bulk	TIME-RESOLVED MORPHOLOGICAL AND TRANSCRIPTOMIC CHARACTERIZATION OF EARLY ENTE... GSE282673 Gallus gallus	7 samples	archive_table 320 MB	Not in ASAP	Details
geo bulk	Identification of Cryosensitive Niches and a Targetable FOS/AP‑1 Program in t... GSE285362 Homo sapiens	7 samples	archive_table 388 MB	Not in ASAP	Details
geo bulk	Autophagy activators normalize aberrant Tau proteostasis and rescue synapses ... GSE301700 Homo sapiens	7 samples	archive_table 454 MB	Not in ASAP	Details
geo bulk	Angiopoietin-2 aggravates Alzheimer’s disease by promoting BBB breakdown and ... GSE286360 Mus musculus	7 samples	archive_table 468 MB	Not in ASAP	Details
geo bulk	CD74⁺ Myeloid Cells across Brain Pathologies GSE293921 Mus musculus	7 samples	archive_table 482 MB	Not in ASAP	Details
geo bulk	IL-2/CD25 Fusion Protein Enhances Expansion of Antigen-Specific CD8⁺ T Cells ... GSE329148 Mus musculus	7 samples	archive_table 520 MB	Not in ASAP	Details
geo bulk	Characterization of mechanism of action behind acquired resistance to KRASG12... GSE298318 Mus musculus	7 samples	archive_table 544 MB	Not in ASAP	Details
geo bulk	Defective LCN2–FN1 signaling impairs stromal–immune communication and underli... GSE303655 Mus musculus	7 samples	archive_table 548 MB	Not in ASAP	Details
geo bulk	Multicellular derived S100A8/A9 maintains megakaryocytes in an immature state... GSE275370 Homo sapiens; Mus musculus	7 samples	archive_table 550 MB	Not in ASAP	Details
geo bulk	Spatiotemporal transcriptomics characterizes immune microenvironment during m... GSE327302 Mus musculus	7 samples	archive_table 648 MB	Not in ASAP	Details
geo bulk	Engineering perfusable vascular networks in organoids-on-chip GSE295488 Homo sapiens	7 samples	archive_table 669 MB	Not in ASAP	Details
geo bulk	Timely NODAL Inhibition Driven by Consecutive Lefty1 and Lefty2 Is Required f... GSE272574 Mus musculus	7 samples	archive_table 709 MB	Not in ASAP	Details
geo bulk	Macropinocytosis inhibition attenuates pro-fibrotic responses in lung fibrobl... GSE300087 Homo sapiens	7 samples	archive_table 709 MB	Not in ASAP	Details
geo bulk	Radiofrequency regulates the BET-mediated pathways in radial glia differentia... GSE302899 Homo sapiens	7 samples	archive_table 733 MB	Not in ASAP	Details
geo bulk	PI3 Kinase and IFN- pathways, identified in an unbiased kinase drug screen... GSE317951 Homo sapiens	7 samples	archive_table 765 MB	Not in ASAP	Details
geo bulk	Spatial mapping of telocytes along the crypt-villus axis reveals their role i... GSE297695 Mus musculus	7 samples	archive_table 887 MB	Not in ASAP	Details
geo bulk	ERK signaling integrates multiple mechanisms to drive cortical evolutionary e... GSE341151 Mus musculus	7 samples	archive_table 889 MB	Not in ASAP	Details
geo bulk	Uncovering a Key Metabolic Role of the GATA1 N-Terminus in Red Blood Cell Dev... GSE298761 Mus musculus	7 samples	archive_table 897 MB	Not in ASAP	Details
geo bulk	Longitudinal zone- and cell-type-specific immune responses sustain Arabidopsi... GSE289716 Arabidopsis thaliana	7 samples	archive_table 917 MB	Not in ASAP	Details