External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Gene Expression Changes Induced by FBXW5 overexpression in triple-negative br... GSE326436 Mus musculus; Homo sapiens	8 samples	counts_table 491 KB	Not in ASAP	Details
geo bulk	Hepatocyte RIPK1 scaffolding function protects against alcohol-induced liver ... GSE341199 Mus musculus	8 samples	counts_table 492 KB	Not in ASAP	Details
geo bulk	Elucidating the mechanism underlying sepsis- induced hemolysis, RNA_seq of Ku... GSE328774 Mus musculus	8 samples	counts_table 496 KB	Not in ASAP	Details
geo bulk	Cdk7 regulates peripheral myelin sheath extension and lipid content. GSE308035 Mus musculus	8 samples	counts_table 496 KB	Not in ASAP	Details
geo bulk	Isolation, Validation, and Long-Term Culture of Mouse Ear Fibroblasts GSE330836 Mus musculus	8 samples	counts_table 500 KB	Not in ASAP	Details
geo bulk	Bulk RNA-seq of EO771 tumor sample Gq_DREADD vs. Ctr GSE309464 Mus musculus	8 samples	counts_table 506 KB	Not in ASAP	Details
geo bulk	A Prevalent Disease-Associated SNP in the Human ID3 Gene Regulates E-Protein ... GSE316072 Mus musculus	8 samples	counts_table 507 KB	Not in ASAP	Details
geo bulk	Non-canonical function of transferrin receptor-1 promotes breast cancer metas... GSE318333 Homo sapiens	8 samples	counts_table 509 KB	Not in ASAP	Details
geo bulk	CD97/ADGRE5 attenuates the induction of adaptive type 2 immune responses in a... GSE339436 Mus musculus	8 samples	counts_table 511 KB	Not in ASAP	Details
geo bulk	Transcriptome analysis of effects of TPH1 in prostate cancer cell lines GSE302430 Homo sapiens	8 samples	counts_table 515 KB	Not in ASAP	Details
geo bulk	Filifactor alocis FtxA-dependent suppression of inflammation and apoptosis GSE311337 Homo sapiens	8 samples	counts_table 515 KB	Not in ASAP	Details
geo bulk	Overexpression of KLF4 in SSc lung fibroblasts initiates dedifferentiation GSE317058 Homo sapiens	8 samples	counts_table 517 KB	Not in ASAP	Details
geo bulk	Transcript changes in human pericytes exposed to Clostridioides difficile Tcd... GSE304120 Homo sapiens	8 samples	counts_table 521 KB	Not in ASAP	Details
geo bulk	TPX2 as key downstream target of the eIF4A controlled translational program ... GSE216192 Homo sapiens	8 samples	counts_table 521 KB	Not in ASAP	Details
geo bulk	Analysis of human macrophages exposed to marennine GSE290406 Homo sapiens	8 samples	counts_table 523 KB	Not in ASAP	Details
geo bulk	Metastatic triple-negative breast cancer secretes heme metabolites to alter m... GSE277310 Mus musculus	8 samples	counts_table 529 KB	Not in ASAP	Details
geo bulk	TDP-43 dysfunction leads to the accumulation of cryptic transposable element-... GSE315972 Homo sapiens	8 samples	counts_table 531 KB	Not in ASAP	Details
geo bulk	RBFOX1 Deficiency Induces Innate Microglia Generation in APOE4 Human Cerebral... GSE292560 Homo sapiens	8 samples	archive_table 540 KB	Not in ASAP	Details
geo bulk	Whole-transcriptome sequencing of NT2.5, NT2.5LM, and NT2.5LV: a HER2-positiv... GSE336999 Mus musculus	8 samples	counts_table 543 KB	Not in ASAP	Details
geo bulk	Growth of subcutaneous MC38 colorectal cancer triggers mild cachexia GSE319517 Mus musculus	8 samples	counts_table 543 KB	Not in ASAP	Details
geo bulk	APEX-seq Maps Transcriptome-wide Subcellular RNA Localization in Living Cells GSE299592 Homo sapiens	8 samples	counts_table 548 KB	Not in ASAP	Details
geo bulk	RNA-seq of BJ fibroblasts transfected with control or FH siRNA GSE317434 Homo sapiens	8 samples	counts_table 550 KB	Not in ASAP	Details
geo bulk	DOT1L regulates MYC/Mondo turnover on chromatin GSE223175 Homo sapiens	8 samples	counts_table 556 KB	Not in ASAP	Details
geo bulk	Ago2 loss restores sensitivity to immune checkpoint inhibitors in immunorefra... GSE333285 Mus musculus	8 samples	counts_table 558 KB	Not in ASAP	Details
geo bulk	Deciphering the impact of RAC1-SPTAN1 in ARPKD cystogenesis using multifacete... GSE288738 Homo sapiens	8 samples	counts_table 559 KB	Not in ASAP	Details