External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Cellular Reprogramming of H3K27M Pediatric High-Grade Glioma to Neuron-like S... GSE298781 Homo sapiens	8 samples	counts_table 572 KB	Not in ASAP	Details
geo bulk	RNAseq from MDA-MB-231 shYB-1 and sh control GSE117856 Homo sapiens	8 samples	counts_table 577 KB	Not in ASAP	Details
geo bulk	HNF1B integrates signals in a feed-forward loop driving kidney disease progre... GSE297988 Mus musculus	8 samples	counts_table 578 KB	Not in ASAP	Details
geo bulk	Effects of Er:YAG laser irradiation on proliferation and alteration of gene e... GSE295519 Mus musculus	8 samples	counts_table 581 KB	Not in ASAP	Details
geo bulk	Bulk RNA-sequencing of four soft tissue sarcoma cell lines treated in vitro f... GSE313237 Homo sapiens	8 samples	counts_table 581 KB	Not in ASAP	Details
geo bulk	CDK2 Inhibition Exerts RB-Independent Antitumor Activity in CDK4/6 Inhibitor-... GSE265952 Homo sapiens	8 samples	counts_table 590 KB	Not in ASAP	Details
geo bulk	Androgen Excess Uncouples Circulating and Hepatic Lipid Homeostasis in Female... GSE326073 Mus musculus	8 samples	counts_table 590 KB	Not in ASAP	Details
geo bulk	Percentage of CD56⁺ monocytes at neutrophil engraftment is associated with th... GSE300085 Homo sapiens	8 samples	counts_table 592 KB	Not in ASAP	Details
geo bulk	Functional annotation of insulin-responsive genes in human adipocytes reveals... GSE335322 Homo sapiens	8 samples	counts_table 593 KB	Not in ASAP	Details
geo bulk	Bulk RNA-seq of human metastatic Breast Cancer cells GSE281487 Homo sapiens	8 samples	counts_table 595 KB	Not in ASAP	Details
geo bulk	Alveolar type 2 cell LRP1 is needed for surfactant phospholipids and pulmonar... GSE297307 Homo sapiens	8 samples	counts_table 596 KB	Not in ASAP	Details
geo bulk	Intracellular Macrophage Survival during Pneumocystis infection GSE341376 Mus musculus	8 samples	counts_table 597 KB	Not in ASAP	Details
geo bulk	EZH2 cooperates with SREBP2 to establish the epigenomic, transcriptomic and m... GSE324559 Homo sapiens	8 samples	counts_table 597 KB	Not in ASAP	Details
geo bulk	Aquaporin-1 sustains lymphangiogenic responses in inflammatory microenvironments GSE312554 Homo sapiens	8 samples	counts_table 598 KB	Not in ASAP	Details
geo bulk	Gene Expression profiling of TgCRND8 brains at 18 months GSE318217 Mus musculus	8 samples	counts_table 599 KB	Not in ASAP	Details
geo bulk	A Mitochondria-Driven Quality Control Mechanism for Peroxisomal Membrane Prot... GSE310531 Homo sapiens	8 samples	counts_table 605 KB	Not in ASAP	Details
geo bulk	Transcription factor Etv3 controls the tolerogenic function of dendritic cell... GSE306737 Mus musculus	8 samples	counts_table 605 KB	Not in ASAP	Details
geo bulk	Transcriptional profiling of AGPS knockout breast cancer cells treated with T... GSE300281 Mus musculus	8 samples	counts_table 606 KB	Not in ASAP	Details
geo bulk	3D epigenomic landscape of human retinal pigment epithelium [RNA-seq] GSE307355 Homo sapiens	8 samples	counts_table 609 KB	Not in ASAP	Details
geo bulk	Gene expression profiling of NAT10 knockdown in HepG2 hepatocellular carcinom... GSE336019 Homo sapiens	8 samples	counts_table 618 KB	Not in ASAP	Details
geo bulk	Bulk RNA-sequencing of single 6 dpf wild-type and osgep G177A homozygote larvae GSE330158 Danio rerio	8 samples	counts_table 620 KB	Not in ASAP	Details
geo bulk	Developing a multimodal therapy for glioblastoma using oncolytic virus delive... GSE310003 Homo sapiens	8 samples	counts_table 621 KB	Not in ASAP	Details
geo bulk	Oncogenic KRAS promotes pancreatic ductal adenocarcinoma (PDAC) through post-... GSE285095 Mus musculus	8 samples	counts_table 623 KB	Not in ASAP	Details
geo bulk	Loss of cisPTase function in the liver promotes a highly penetrant form of fa... GSE315410 Mus musculus	8 samples	counts_table 628 KB	Not in ASAP	Details
geo bulk	Impact of ECTV C15 expression on the development of CD8+ effector T cells [d10] GSE308809 Mus musculus	8 samples	counts_table 634 KB	Not in ASAP	Details