External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Carotid Body Dysfunction Contributes to Respiratory Dysfunction in Rett Syndrome GSE335892 Mus musculus	8 samples	archive_table 1.19 MB	Not in ASAP	Details
geo bulk	Anti-atherogenic actions of pomegranate polyphenol punicalagin and Its metabo... GSE311266 Mus musculus	8 samples	counts_table 1.19 MB	Not in ASAP	Details
geo bulk	Gene expression profile in EpCAM+ epithelial cells from mouse esophagus GSE338986 Mus musculus	8 samples	counts_table 1.2 MB	Not in ASAP	Details
geo bulk	Severe hyperchylomicronemia sensitizes the heart to pathological remodeling: ... GSE334977 Mus musculus	8 samples	counts_table 1.22 MB	Not in ASAP	Details
geo bulk	RNA-seq for iPSC-derived macrophages with/without Lipopolysaccharide (LPS) st... GSE237489 Homo sapiens	8 samples	counts_table 1.23 MB	Not in ASAP	Details
geo bulk	RNA sequencing of E15.5 isolated progenitors cells from wildtype and Zmiz1-KO... GSE225333 Mus musculus	8 samples	counts_table 1.23 MB	Not in ASAP	Details
geo bulk	Cancer stem cells are hyper-responsive sensors of tumor microenvironment in o... GSE292485 Homo sapiens	8 samples	counts_table 1.23 MB	Not in ASAP	Details
geo bulk	The E-protein Daughterless regulates protein translation and memory in adult ... GSE279158 Drosophila melanogaster	8 samples	counts_table 1.25 MB	Not in ASAP	Details
geo bulk	Transcription factor Satb1 modulates the functionality of in vitro stimulated... GSE190948 Mus musculus	8 samples	archive_table 1.25 MB	Not in ASAP	Details
geo bulk	Gain- and loss-of-function RNA-seq analysis reveals DDIT4-driven transcriptio... GSE310361 Homo sapiens	8 samples	counts_table 1.28 MB	Not in ASAP	Details
geo bulk	High altitude de-acclimatization leads to long-term immune-suppression via up... GSE315734 Mus musculus	8 samples	counts_table 1.28 MB	Not in ASAP	Details
geo bulk	LINGO4 coordinates intrinsic IL-22 production and microbiota-dependent ILC3 h... GSE325926 Mus musculus	8 samples	counts_table 1.28 MB	Not in ASAP	Details
geo bulk	Characterize transcriptomic changes in the PFC and hippocampus from wild-type... GSE325748 Mus musculus	8 samples	counts_table 1.29 MB	Not in ASAP	Details
geo bulk	Prevention of cholestatic liver disease through BCL6-FXR enterohepatic crosstalk GSE296552 Mus musculus	8 samples	counts_table 1.29 MB	Not in ASAP	Details
geo bulk	LncRNA H19 exacerbates hepatic inflammation and oxidative stress in alcohol-r... GSE315288 Mus musculus	8 samples	counts_table 1.29 MB	Not in ASAP	Details
geo bulk	Ganoderic Acid A alleviates ulcerative colitis by inhibiting the IL-17 signal... GSE317392 Mus musculus	8 samples	counts_table 1.3 MB	Not in ASAP	Details
geo bulk	Prostate-specific CRISPR knock-in of human SKP2 induces prostatic intraepithe... GSE295398 Mus musculus	8 samples	counts_table 1.32 MB	Not in ASAP	Details
geo bulk	Pre-existing chromatin states regulate KLF4 binding to eliminate leukemic cells GSE259333 Mus musculus	8 samples	archive_table 1.32 MB	Not in ASAP	Details
geo bulk	Transcriptome of aTC6 cells transfected with Yy1-overexpressing construct GSE328602 Mus musculus	8 samples	counts_table 1.32 MB	Not in ASAP	Details
geo bulk	Immunoprecipitation of m¹A methylated mRNA upon TRMT61B overexpression GSE312403 Homo sapiens	8 samples	counts_table 1.33 MB	Not in ASAP	Details
geo bulk	The transcriptomic characteristics of macrophages in liver fibrosis. GSE239567 Mus musculus	8 samples	counts_table 1.35 MB	Not in ASAP	Details
geo bulk	Fibroblast-driven transcriptional reprogramming in response to doxorubicin in... GSE336658 Mus musculus	8 samples	counts_table 1.37 MB	Not in ASAP	Details
geo bulk	TP53-TAU axis regulates microtubule bundling to control alveolar stem cell me... GSE287523 Mus musculus	8 samples	counts_table 1.37 MB	Not in ASAP	Details
geo bulk	A MYC Family Switch: L-MYC Drives and Maintains Neuroendocrine Lineage Progra... GSE324984 Homo sapiens	8 samples	counts_table 1.37 MB	Not in ASAP	Details
geo bulk	Activation of sympathetic nervous system drives dry eye onset via norepinephr... GSE288681 Mus musculus	8 samples	counts_table 1.39 MB	Not in ASAP	Details