External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	TDP-43 dysfunction leads to the accumulation of cryptic transposable element-... GSE310722 Homo sapiens	8 samples	archive_table 2.2 MB	Not in ASAP	Details
geo bulk	Perioperative administration of fucoidan induced immune-suppressive changes t... GSE316433 Mus musculus	8 samples	counts_table 2.2 MB	Not in ASAP	Details
geo bulk	Genome-wide identification of vitamin D receptor–regulated enhancer RNAs reve... GSE326394 Homo sapiens	8 samples	counts_table 2.22 MB	Not in ASAP	Details
geo bulk	Advanced dual-payload antibody-drug conjugates (DualADCs) for targeted cancer... GSE312957 Mus musculus	8 samples	counts_table 2.25 MB	Not in ASAP	Details
geo bulk	Elucidating the mechanisms underlying KRT19 contributes to NSCLC progression GSE298926 Homo sapiens	8 samples	counts_table 2.29 MB	Not in ASAP	Details
geo bulk	SELENOF Functions as a Tumor Suppressor in Skin Cancer GSE337871 Mus musculus	8 samples	counts_table 2.29 MB	Not in ASAP	Details
geo bulk	Cancer Stem Cells Induce Proline Synthesis through FAM3C-Mediated SPIN1 Stabi... GSE307672 Homo sapiens	8 samples	counts_table 2.31 MB	Not in ASAP	Details
geo bulk	Transcriptional changes in GNAQ R183Q mouse back skin GSE325430 Mus musculus	8 samples	archive_table 2.31 MB	Not in ASAP	Details
geo bulk	Differential gene expression in Toxoplasma gondii-infected cells with modulat... GSE335790 Chlorocebus sabaeus	8 samples	counts_table 2.34 MB	Not in ASAP	Details
geo bulk	Dual-Coupling Amplified Electrostimulaton Drives In Situ Bone Regeneration GSE324996 Homo sapiens	8 samples	archive_table 2.35 MB	Not in ASAP	Details
geo bulk	Modular small RNA drives the emergence of virulence traits and environmental ... GSE272640 Vibrio cholerae O1 biovar El Tor	8 samples	archive_table 2.36 MB	Not in ASAP	Details
geo bulk	NAT10-Dependent N4-acetylcytidine (ac4C) on R-loops Drive Glioblastoma Tumori... GSE307597 Homo sapiens	8 samples	counts_table 2.38 MB	Not in ASAP	Details
geo bulk	Resmetirom ameliorates fibrogenesis in hepatic stellate cells via thyroid hor... GSE334408 Homo sapiens	8 samples	archive_table 2.39 MB	Not in ASAP	Details
geo bulk	CTLA-4 blockade enhances germinal center reactions in lymph nodes that drive ... GSE293916 Mus musculus	8 samples	archive_table 2.39 MB	Not in ASAP	Details
geo bulk	Characterization of a novel family of multitarget small molecules in glioblas... GSE283024 Homo sapiens	8 samples	counts_table 2.47 MB	Not in ASAP	Details
geo bulk	In vitro 3D model of the immune-oncology stromal barrier for evaluating T-cel... GSE289926 Homo sapiens	8 samples	archive_table 2.47 MB	Not in ASAP	Details
geo bulk	LUAD tumor, normal adjacent and tumoroid bulk transcriptomics GSE287471 Homo sapiens	8 samples	counts_table 2.51 MB	Not in ASAP	Details
geo bulk	Transcriptional profiling of sorafenib-resistant and parental sensitive HepG2... GSE322742 Homo sapiens	8 samples	archive_table 2.52 MB	Not in ASAP	Details
geo bulk	Metal Organic Framework based Synergistic Improvement of Hypoxia for Optimizi... GSE324514 Mus musculus	8 samples	counts_table 2.7 MB	Not in ASAP	Details
geo bulk	Effect of genetic knockdown Emb on enteric neural crest cell development in m... GSE327538 Mus musculus	8 samples	counts_table 2.8 MB	Not in ASAP	Details
geo bulk	Transcription profiling of KCTD17 knockdown human beta-cell line EndoC-bH1 GSE297141 Homo sapiens	8 samples	counts_table 2.87 MB	Not in ASAP	Details
geo bulk	Paternal cardiac injury elicits an inflammatory signal relay to the gonads wi... GSE343585 Danio rerio	8 samples	counts_table 2.94 MB	Not in ASAP	Details
geo bulk	A Period1 inducer specifically advances circadian clock in mice GSE299768 Mus musculus	8 samples	counts_table 3.06 MB	Not in ASAP	Details
geo bulk	MSKCC Study 5- RNA-seq of ISL1 overexpression across different knockout genot... GSE343365 Homo sapiens	8 samples	counts_table 3.21 MB	Not in ASAP	Details
geo bulk	Comparative transcriptomic analysis of CD83+ly75+GCB cells in wild type and G... GSE285673 Mus musculus	8 samples	archive_table 3.24 MB	Not in ASAP	Details