External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Glucose Transport Dependency Defines a Therapeutic Vulnerability in Myeloprol... GSE319980 Mus musculus	8 samples	counts_table 3.29 MB	Not in ASAP	Details
geo bulk	Comparative transcriptomic analysis of germinal center B cells between DN su... GSE270907 Mus musculus	8 samples	archive_table 3.29 MB	Not in ASAP	Details
geo bulk	Transcriptome analysis of HCT116 cells subjected to low glucose or depleted o... GSE291324 Homo sapiens	8 samples	counts_table 3.33 MB	Not in ASAP	Details
geo bulk	Hypomorphic Lig4 gene mutation in mice predisposes to Th1-skewing intestinal ... GSE294169 Mus musculus	8 samples	archive_table 3.33 MB	Not in ASAP	Details
geo bulk	Methylation variability and LINE-1 activation in multiple myeloma [RNA-seq] GSE301729 Homo sapiens	8 samples	archive_table 3.63 MB	Not in ASAP	Details
geo bulk	Effects of PAK4 deficiency on the transcriptome of hepatic stellate cells GSE308719 Mus musculus	8 samples	counts_table 3.77 MB	Not in ASAP	Details
geo bulk	Decreased S100A7 expression is linked to altered differentiation-, autophagy-... GSE312362 Homo sapiens	8 samples	counts_table 3.87 MB	Not in ASAP	Details
geo bulk	HIF1 Counteracts FOXO1/Bim-associated Follicle Atresia in Mouse Ovaries by Pr... GSE335191 Mus musculus	8 samples	archive_table 3.88 MB	Not in ASAP	Details
geo bulk	Enhanced mitophagy promotes lung repair and regeneration by restoring epithel... GSE317253 Mus musculus	8 samples	counts_table 3.95 MB	Not in ASAP	Details
geo bulk	Effects of TMEM55B deficiency on hepatic gene expression of Western diet-fed ... GSE273884 Mus musculus	8 samples	counts_table 3.97 MB	Not in ASAP	Details
geo bulk	Glutamine metabolism suppresses neutrophil recruitment via epigenetic regulat... GSE289200 Mus musculus	8 samples	counts_table 3.98 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of hepatic response to glucose intake during fasting... GSE295094 Mus musculus	8 samples	counts_table 4 MB	Not in ASAP	Details
geo bulk	PDGF signaling regulates the adipocyte-to-fibroblast transition in wound healing GSE327928 Mus musculus	8 samples	counts_table 4.04 MB	Not in ASAP	Details
geo bulk	Vip+ Vagal Neurons Control Allergen-Induced Responses GSE306848 Mus musculus	8 samples	counts_table 4.05 MB	Not in ASAP	Details
geo bulk	MYRF Controls Mesothelium Specification, Signaling, and Plasticity [RNA-Seq] GSE288777 Mus musculus	8 samples	counts_table 4.05 MB	Not in ASAP	Details
geo bulk	Lamins gate nuclear and chromatin structures for cardiomyocyte maturation gen... GSE330013 Mus musculus	8 samples	counts_table 4.07 MB	Not in ASAP	Details
geo bulk	The Oral–Gut–Joint Axis in Osteoarthritis: A Multiomics Case‒Control Study GSE331536 Homo sapiens	8 samples	counts_table 4.08 MB	Not in ASAP	Details
geo bulk	Transcriptomic analysis of NvfoxE-like knockdown in Nematostella vectensis GSE335078 Nematostella vectensis	8 samples	archive_table 4.25 MB	Not in ASAP	Details
geo bulk	Circadian Disruption Triggers Trophoblast Differentiation Failure via CLOCK-D... GSE300156 Homo sapiens	8 samples	archive_table 4.29 MB	Not in ASAP	Details
geo bulk	The role of LEDGF in transcription is exploited by HIV-1 to position integrat... GSE279646 Homo sapiens	8 samples	counts_table 4.71 MB	Not in ASAP	Details
geo bulk	LRMDA suppresses colonic inflammation, colorectal cancer and bacterial infect... GSE317858 Mus musculus	8 samples	counts_table 4.77 MB	Not in ASAP	Details
geo bulk	Improved co-transcriptional splicing of readthrough transcripts during chemot... GSE310243 Homo sapiens	8 samples	counts_table 4.77 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of HepG2 cells upon EZH2 knockdown GSE312184 Homo sapiens	8 samples	archive_table 4.85 MB	Not in ASAP	Details
geo bulk	Trivalent arsenicals enhance UVA-associated genomic instability in human kera... GSE336622 Homo sapiens	8 samples	counts_table 4.86 MB	Not in ASAP	Details
geo bulk	PHLDA2 promotes breast cancer metastasis by increasing extracellular matrix d... GSE279530 Homo sapiens	8 samples	counts_table 4.92 MB	Not in ASAP	Details