External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Genetic Deletion of the Inflammatory Bowel Disease -Associated Risk Gene Rgs1... GSE298744 Mus musculus	8 samples	archive_table 712 MB	Not in ASAP	Details
geo bulk	Macrophages restrict tumor immune infiltration 3 by controlling collagen topo... GSE320473 Mus musculus	8 samples	archive_table 717 MB	Not in ASAP	Details
geo bulk	Helicobacter pylori infection causes gastric mucosal reprogramming into a fet... GSE319373 Mus musculus	8 samples	archive_table 732 MB	Not in ASAP	Details
geo bulk	Nuclear Speckles enable processing of RNA from GC-rich Isochores [4sU] GSE310859 Homo sapiens	8 samples	archive_table 742 MB	Not in ASAP	Details
geo bulk	Transcription factor codes patterning neuronal groundplans of the cerebrum GSE298900 Drosophila melanogaster	8 samples	archive_table 755 MB	Not in ASAP	Details
geo bulk	Emergence of Disease-relevant Aberrant Epithelial Cell States in Human Alveol... GSE333566 Homo sapiens	8 samples	archive_table 787 MB	Not in ASAP	Details
geo bulk	Transcriptional Programming of Adult Human Pancreas-Derived Progenitor Cells ... GSE332956 Homo sapiens	8 samples	archive_table 799 MB	Not in ASAP	Details
geo bulk	Dual profiling of DNA modifications with enhancer features during the exit of... GSE336126 Mus musculus	8 samples	archive_table 810 MB	Not in ASAP	Details
geo bulk	Rebalancing the brain: The therapeutic potential of false neurotransmitters i... GSE235285 Mus musculus	8 samples	archive_table 870 MB	Not in ASAP	Details
geo bulk	Tfam-Mediated Metabolic Perturbation in RORgt+ Lymphocytes Impacts Intestinal... GSE314136 Mus musculus	8 samples	archive_table 890 MB	Not in ASAP	Details
geo bulk	Radiation Induces Persistent Dysregulation and Functional Impairment in CD8+ ... GSE329314 Mus musculus	8 samples	archive_table 964 MB	Not in ASAP	Details
geo bulk	Immune cell sequencing after allogeneic hematopoietic cell transplantation GSE290836 Homo sapiens	8 samples	archive_table 977 MB	Not in ASAP	Details
geo bulk	Human gastric extracellular matrix hydrogels maintain organoid growth and red... GSE303526 Homo sapiens	8 samples	archive_table 1010 MB	Not in ASAP	Details
geo bulk	Folate Receptor Beta Regulates Macrophage NLRP3 Inflammasome Activation and P... GSE301541 Homo sapiens	8 samples	archive_table 1020 MB	Not in ASAP	Details
geo bulk	Patient Derived Neomorphic SEPTIN6 Mutations Induce Hematopoietic Stem Cell S... GSE338788 Homo sapiens	8 samples	archive_table 1.18 GB	Not in ASAP	Details
geo bulk	Inflammatory epiCaspase-1 dampens immunogenic cell death by remotely skewing ... GSE298319 Mus musculus	8 samples	archive_table 1.19 GB	Not in ASAP	Details
geo bulk	Prior targeted therapy treatment and cellular composition modulate the effect... GSE310271 Homo sapiens	8 samples	archive_table 1.3 GB	Not in ASAP	Details
geo bulk	The RNA-binding protein PTBP3 regulates alternative polyadenylation in naïve ... GSE148899 Mus musculus	8 samples	archive_table 1.33 GB	Not in ASAP	Details
geo bulk	Distinct activity in prefrontal projections promotes temporal control of action GSE322712 Mus musculus	8 samples	archive_table 1.41 GB	Not in ASAP	Details
geo bulk	Latexin deletion in the bone marrow niche suppresses leukemia via LIFR signal... GSE330528 Mus musculus	8 samples	archive_table 1.67 GB	Not in ASAP	Details
geo bulk	GFI1 regulates NK cell maturation and function [scMultiome-seq]. GSE313719 Mus musculus	8 samples	archive_table 1.72 GB	Not in ASAP	Details
geo bulk	Sequence-specific RNA recognition drives Restrictor-mediated termination of e... GSE300320 Homo sapiens	8 samples	archive_table 1.78 GB	Not in ASAP	Details
geo bulk	Reconstitution of spermatogenesis and continuous generation of functional hap... GSE283341 Mus musculus	8 samples	archive_table 1.83 GB	Not in ASAP	Details
geo bulk	Intravitreal AAV delivery induces integrin-dependent ocular inflammation and ... GSE308982 Sus scrofa	8 samples	archive_table 2.13 GB	Not in ASAP	Details
geo bulk	The transcriptional regulatory landscape of LMO2 in tumor angiogenesis and br... GSE235320 Homo sapiens	8 samples	archive_table 2.67 GB	Not in ASAP	Details