External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	CELF2-dependent RNA regulation supports cortical architecture and synaptic st... GSE319433 Mus musculus	8 samples	archive_table 2.74 GB	Not in ASAP	Details
geo bulk	Aldosterone-induced gene expression changes in the brain [Multiomic] GSE326424 Mus musculus	8 samples	archive_table 3.07 GB	Not in ASAP	Details
geo bulk	Reduced LACTB expression in myeloid cells is associated with elevated succiny... GSE324494 Homo sapiens	8 samples	archive_table 3.15 GB	Not in ASAP	Details
geo bulk	A configurable AP-1 network governs cell-state heterogeneity and adaptive pla... GSE342614 Homo sapiens	8 samples	archive_table 3.73 GB	Not in ASAP	Details
geo bulk	Depolymerizing F-actin accelerates the exit from pluripotency to enhance stem... GSE291096 Homo sapiens	8 samples	archive_table 5.09 GB	Not in ASAP	Details
geo bulk	Investigation of epigenetic and transcriptomic features of human B cell devel... GSE322590 Homo sapiens	8 samples	archive_table 5.58 GB	Not in ASAP	Details
geo bulk	Genetic background and transient prenatal disruption of vitamin A signaling d... GSE307731 Mus musculus	8 samples	archive_table 5.91 GB	Not in ASAP	Details
geo bulk	Multiple defects in mouse stem cell based embryo models lacking all Hox funct... GSE288697 Mus musculus	8 samples	archive_table 5.92 GB	Not in ASAP	Details
geo bulk	Hippo signaling differentially regulates distal progenitor subpopulations and... GSE324638 Mus musculus	8 samples	archive_table 6.48 GB	Not in ASAP	Details
geo bulk	EBF1 regulates sensory establishment in the cochlea by positioning the medial... GSE310246 Mus musculus	8 samples	archive_table 7.7 GB	Not in ASAP	Details
geo bulk	Species-specific oxygen sensing governs the initiation of vertebrate limb reg... GSE292215 Mus musculus	8 samples	archive_table 7.71 GB	Not in ASAP	Details
geo bulk	Uhrf1 loss alters Ctcf-mediated topological organization during early mouse e... GSE308175 Mus musculus	8 samples	archive_table 8.12 GB	Not in ASAP	Details
geo bulk	BRD8 is a therapeutic vulnerability for overcoming resistance to dual ER/HER2... GSE286038 Homo sapiens	8 samples	archive_table 8.97 GB	Not in ASAP	Details
geo bulk	Mechanisms by which whole genome doubling drives breast tumor evolution [scMu... GSE274224 Mus musculus	8 samples	archive_table 9.17 GB	Not in ASAP	Details
geo bulk	Multi-omic profiling unveils molecular landscapes and heterogeneous tumor mic... GSE277797 Homo sapiens	8 samples	archive_table 12.7 GB	Not in ASAP	Details
geo bulk	Argonaute proteins orchestrate Meiotic Sex Chromosome Inactivation and timing... GSE332917 Mus musculus	8 samples	archive_table 15.8 GB	Not in ASAP	Details
geo bulk	Corticosterone-linked microglial activity underpins sexually dimorphic neurop... GSE298669 Mus musculus	8 samples	archive_table 18.3 GB	Not in ASAP	Details
geo bulk	High throughput sequencing of T cells from a patient undergoing immune checkp... GSE314413 Homo sapiens	9 samples	counts_table 247 Bytes	Not in ASAP	Details
geo bulk	High throughput sequencing of T cells from a patient undergoing immune checkp... GSE314283 Homo sapiens	9 samples	counts_table 248 Bytes	Not in ASAP	Details
geo bulk	Heparin prevents AKI to CKD transition via HDAC1-mediated anti-inflammatory e... GSE280033 Mus musculus	9 samples	counts_table 2.67 KB	Not in ASAP	Details
geo bulk	Iron Limitation-Induced Modulation of Transcription in Chlamydia trachomatis GSE317337 Chlamydia trachomatis	9 samples	counts_table 20.9 KB	Not in ASAP	Details
geo bulk	Dual RNA-seq analyses provide insights into the biology of the fish pathogen ... GSE254974 Piscirickettsia salmonis; Salmo salar	9 samples	counts_table 41.1 KB	Not in ASAP	Details
geo bulk	Culturomics reveals Fusobacterium-Prevotella mutualism as a hallmark of nasop... GSE320346 Fusobacterium nucleatum; Prevotella intermedia	9 samples	counts_table 45.5 KB	Not in ASAP	Details
geo bulk	Post-transcriptional regulation of a protein chaperone by the mRNA encoding t... GSE225655 Streptococcus pneumoniae	9 samples	counts_table 52.8 KB	Not in ASAP	Details
geo bulk	LuxR regulates Flavobacterium covae pathogenesis in channel catfish (Ictaluru... GSE328594 Flavobacterium covae	9 samples	counts_table 59.1 KB	Not in ASAP	Details