External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Gene expression altered by Sox2 T258A mutation in teratomas GSE176212 Mus musculus	2 samples	counts_table 2.16 MB	Not in ASAP	Details
geo bulk	RNA seq data of sorafenib resistant HepG2 cells GSE248764 Homo sapiens	2 samples	counts_table 2.18 MB	Not in ASAP	Details
geo bulk	Profiling expression of genes at a critical developmental timepoint in diaphr... GSE155840 Mus musculus	2 samples	archive_table 2.18 MB	Not in ASAP	Details
geo bulk	Differences in Biological Basis and Its Effects on Vascular Endothelium in Dy... GSE180802 Mus musculus	2 samples	counts_table 2.18 MB	Not in ASAP	Details
geo bulk	Expression data comparing 8024 wild type (WT) and MAEL knockout (KO) cells GSE175454 Homo sapiens	2 samples	counts_table 2.19 MB	Not in ASAP	Details
geo bulk	Chronic pharmacologic manipulation of dopamine transmission ameliorates metab... GSE269732 Mus musculus	2 samples	counts_table 2.2 MB	Not in ASAP	Details
geo bulk	The effect of two lysines in PML/RARa on mouse haematopoietic stem/progenitor... GSE165046 Mus musculus	2 samples	archive_table 2.22 MB	Not in ASAP	Details
geo bulk	EIF2S3 suppresses proliferation and regulates cell cycle in HL60 cells. GSE163683 Homo sapiens	2 samples	counts_table 2.24 MB	Not in ASAP	Details
geo bulk	Transcriptome profiling of NE-4C cells and NE-4C cells with knockdown of Setd... GSE192373 Mus musculus	2 samples	counts_table 2.26 MB	Not in ASAP	Details
geo bulk	3D spheroid human placenta-derived mesenchymal stem cells enhances anti-infla... GSE174619 Homo sapiens	2 samples	counts_table 2.27 MB	Not in ASAP	Details
geo bulk	Stable overexpression of IRF8 in hepatocellular carcinoma cells hepa1-6 xenog... GSE166368 Mus musculus	2 samples	counts_table 2.32 MB	Not in ASAP	Details
geo bulk	Transcriptome profiling of HCT116 cells and HCT116 cells with knockdown of SE... GSE192372 Homo sapiens	2 samples	counts_table 2.32 MB	Not in ASAP	Details
geo bulk	TNFα secreted from macrophages increases expression of prometastatic integrin... GSE220531 Homo sapiens	2 samples	counts_table 2.35 MB	Not in ASAP	Details
geo bulk	RNA sequencing analysis of LN-229-shControl and LN-229-shMOB2 cells GSE139339 Homo sapiens	2 samples	counts_table 2.36 MB	Not in ASAP	Details
geo bulk	POSTN secreted from glioblastoma stem cells can recruit microglia and upregul... GSE273464 Homo sapiens	2 samples	archive_table 2.37 MB	Not in ASAP	Details
geo bulk	Epigenetic silencing of JAM3 promoted progression in serous ovarian carcinoma... GSE297734 Homo sapiens	2 samples	counts_table 2.39 MB	Not in ASAP	Details
geo bulk	RNA Sequencing Analysis of Gene Expression Profiles in Control versus CIC Kno... GSE142171 Homo sapiens	2 samples	counts_table 2.39 MB	Not in ASAP	Details
geo bulk	The effect of TRIP13 on glioma cell function and signaling pathways GSE141510 Homo sapiens	2 samples	counts_table 2.41 MB	Not in ASAP	Details
geo bulk	Ribosome profiling reveals conserved guanosine residues at ribosome pausing s... GSE250312 Bacillus subtilis	2 samples	archive_table 2.42 MB	Not in ASAP	Details
geo bulk	HEDGEHOG/GLI Modulates The PRR11-SKA2 Bidirectional Transcription Unit in Lun... GSE161226 Homo sapiens	2 samples	counts_table 2.42 MB	Not in ASAP	Details
geo bulk	RNA-seq of primary islets in WT and Brsk2 transgenic mice GSE151915 Mus musculus	2 samples	counts_table 2.43 MB	Not in ASAP	Details
geo bulk	Exploration of human lung resident immunity and response to respiratory viral... GSE152563 Homo sapiens	2 samples	counts_table 2.43 MB	Not in ASAP	Details
geo bulk	RNA sequencing of MV4;11 cells harbouring FLT3-ITD mutations GSE151249 Homo sapiens	2 samples	counts_table 2.43 MB	Not in ASAP	Details
geo bulk	Gene expression profile in cisplatin-resistant lung cancer cells GSE158638 Homo sapiens	2 samples	counts_table 2.44 MB	Not in ASAP	Details
geo bulk	AMF30a Promotes Survival and Function of Human Corneal Endothelial Cells by R... GSE289332 Homo sapiens	2 samples	counts_table 2.46 MB	Not in ASAP	Details