External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Effects of diet-induced obesity and bariatric surgery (sleeve gastrectomy) on... GSE319064 Mus musculus	9 samples	counts_table 4.29 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of neonatal mouse ventricular myocytes (NMVMs) under... GSE318951 Mus musculus	9 samples	counts_table 4.46 MB	Not in ASAP	Details
geo bulk	Raw RNA-seq data for Characterization of the biosynthetic enzymes of the anti... GSE334038 Cephalotaxus fortunei	9 samples	archive_table 4.5 MB	Not in ASAP	Details
geo bulk	Stress-induced ADGRL4 orchestrates tumor dormancy and relapse via Gαs-YAP1 si... GSE311934 Mus musculus	9 samples	counts_table 4.56 MB	Not in ASAP	Details
geo bulk	The effect of UXS1 or MRPL42 on the mRNA expression in hepatocellular carcino... GSE310304 Homo sapiens	9 samples	counts_table 4.63 MB	Not in ASAP	Details
geo bulk	Functional characterization of the orphan hypothetical protein TGGT1_245740, ... GSE335016 Homo sapiens	9 samples	counts_table 4.67 MB	Not in ASAP	Details
geo bulk	Tumor Cell JAGGED-1 Promotes Lymph Node Metastasis and Predicts Recurrence in... GSE252950 Homo sapiens	9 samples	counts_table 4.7 MB	Not in ASAP	Details
geo bulk	Histone deacetylase enzyme activity is not the universal anti-cancer target ... GSE288240 Mus musculus	9 samples	archive_table 4.75 MB	Not in ASAP	Details
geo bulk	Integrated transcriptomic and proteomic analysis reveals Runx2b-associated mo... GSE337778 Culter alburnus	9 samples	counts_table 4.79 MB	Not in ASAP	Details
geo bulk	α2,6-Sialoglycan-regulated anti-tumor immunity of tumor-infiltrating CD8+ T c... GSE316540 Mus musculus	9 samples	counts_table 4.89 MB	Not in ASAP	Details
geo bulk	RNA-seq analysis of HTL and betaine-treated HT-22 cells GSE308639 Mus musculus	9 samples	counts_table 4.91 MB	Not in ASAP	Details
geo bulk	BMAL1 regulates circadian rhythms via phase separation–mediated transcription... GSE325358 Homo sapiens	9 samples	counts_table 5.11 MB	Not in ASAP	Details
geo bulk	Heat stress triggers nuclear invagination and spatial compartmentalization of... GSE292106 Homo sapiens	9 samples	counts_table 5.23 MB	Not in ASAP	Details
geo bulk	hLMR1, a hepatocyte-specific long noncoding RNA that represses amino acid cat... GSE335366 Homo sapiens	9 samples	counts_table 5.24 MB	Not in ASAP	Details
geo bulk	Simultaneous orthogonal cell engineering by a single CRISPR-Cas9 polyfunction... GSE293141 Homo sapiens	9 samples	counts_table 5.27 MB	Not in ASAP	Details
geo bulk	SBNO1 knockdown in the iCCA cell lines SNU1079 GSE277271 Homo sapiens	9 samples	archive_table 5.43 MB	Not in ASAP	Details
geo bulk	Wollemia nobilis transcriptome sequencing GSE321734 Wollemia nobilis	9 samples	archive_table 5.43 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of young, replicative senescent, and premature senes... GSE312006 Homo sapiens	9 samples	counts_table 5.43 MB	Not in ASAP	Details
geo bulk	High throughput sequencing of T cells from donors with Down Syndrome GSE313596 Homo sapiens	9 samples	archive_table 5.49 MB	Not in ASAP	Details
geo bulk	Ustilago maydis disrupts carbohydrate signaling networks to induce hypertroph... GSE282754 Zea mays	9 samples	archive_table 5.88 MB	Not in ASAP	Details
geo bulk	Ellagic Acid as a Novel YTHDF Inhibitor Triggers Tumor-Suppressive in Triple-... GSE303589 Homo sapiens	9 samples	counts_table 6.07 MB	Not in ASAP	Details
geo bulk	RNA-seq analysis of BMDM cells by T17, JHU-083, and control groups GSE296767 Mus musculus	9 samples	counts_table 6.35 MB	Not in ASAP	Details
geo bulk	Uridine Modulates Gene Expression Programs During RANKL-Induced Osteoclastoge... GSE311708 Mus musculus	9 samples	counts_table 6.37 MB	Not in ASAP	Details
geo bulk	Monocytes acquire a tumor-associated IL1B program upon encountering patient-d... GSE308548 Homo sapiens	9 samples	archive_table 6.45 MB	Not in ASAP	Details
geo bulk	Nuclear PTK7 Interacts with DNA-PK Drives DNA Repair and Immune Evasion in Tr... GSE302992 Homo sapiens	9 samples	counts_table 6.54 MB	Not in ASAP	Details