External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Hippocampal estrogen levels, receptor types and epigenetics contribute to sex... GSE313357 Mus musculus	9 samples	archive_table 15.6 MB	Not in ASAP	Details
geo bulk	Effect of Activated Hair Follicle Stem Cells on Gene Expression During Hair R... GSE325704 Mus musculus	9 samples	counts_table 16.5 MB	Not in ASAP	Details
geo bulk	Comparative analyses of the Pacific oyster larvae exposed to the retiniic aci... GSE291194 Magallana gigas	9 samples	archive_table 21.2 MB	Not in ASAP	Details
geo bulk	Dissecting polycomb complexes for enhanced phenotypic selectivity [RNA-Seq] GSE316416 Homo sapiens	9 samples	archive_table 24.4 MB	Not in ASAP	Details
geo bulk	Trans-acting long non-coding RNA modulates long-range chromatin interactions ... GSE208740 Homo sapiens	9 samples	archive_table 25.2 MB	Not in ASAP	Details
geo bulk	Increasing TET expression and 5-hydroxymethylcytosine formation by a carbocyc... GSE225153 Homo sapiens	9 samples	archive_table 25.2 MB	Not in ASAP	Details
geo bulk	A rewired myeloid niche in spleen establishes stress erythropoiesis GSE288200 Mus musculus	9 samples	archive_table 25.6 MB	Not in ASAP	Details
geo bulk	Loss of PIK3CA allows in vitro growth but not in vivo progression of KRAS mut... GSE306343 Mus musculus	9 samples	archive_table 25.8 MB	Not in ASAP	Details
geo bulk	AADAT-Driven Metabolic Control of Malate and CoQ₁₀ Shapes Immune Evasion in T... GSE317623 Mus musculus	9 samples	archive_table 26.1 MB	Not in ASAP	Details
geo bulk	Genome reorganization and its functional impact during breast cancer progress... GSE320216 Homo sapiens	9 samples	archive_table 26.3 MB	Not in ASAP	Details
geo bulk	Lactate-mediated cholesterol uptake promotes liver cancer progression through... GSE316557 Homo sapiens	9 samples	archive_table 26.7 MB	Not in ASAP	Details
geo bulk	Discovery of a global translation activator in Pseudomonas aeruginosa [RNA-seq] GSE298078 Pseudomonas aeruginosa	9 samples	archive_table 29.4 MB	Not in ASAP	Details
geo bulk	Mapping early PRC2 nucleation sites upon Suz12 reintroduction reveals feature... GSE305055 Mus musculus	9 samples	archive_table 29.9 MB	Not in ASAP	Details
geo bulk	Targeting Sufu-mediated Gli transcription alleviates ciliopathic phenotypes [... GSE301707 Mus musculus	9 samples	archive_table 31.2 MB	Not in ASAP	Details
geo bulk	HER2d16 promotes breast cancer metastasis through integrin-driven signaling GSE319154 Homo sapiens	9 samples	archive_table 33.6 MB	Not in ASAP	Details
geo bulk	Hyaluronic acid microneedle delivery of frog skin-derived small extracellular... GSE343822 Mus musculus	9 samples	counts_table 36.6 MB	Not in ASAP	Details
geo bulk	Spatiotemporal transcriptome atlas of water lily floral organogenesis provide... GSE338036 Nymphaea colorata	9 samples	archive_table 53.3 MB	Not in ASAP	Details
geo bulk	Effete and Cullin 4 affect nuclear organization of the gypsy chromatin insula... GSE243451 Drosophila melanogaster	9 samples	archive_table 58.5 MB	Not in ASAP	Details
geo bulk	Transcriptome analysis of TNFα or necroptosis-induced stimulation in the NCI-... GSE270211 Homo sapiens	9 samples	archive_table 70.4 MB	Not in ASAP	Details
geo bulk	Transcriptional and spatial profiling of fibroblasts from human lungs highlig... GSE331144 Homo sapiens	9 samples	archive_table 84.1 MB	Not in ASAP	Details
geo bulk	Cytokine gene combination on iPS cell-derived T cells synergistically improve... GSE252998 Homo sapiens	9 samples	archive_table 114 MB	Not in ASAP	Details
geo bulk	Fibrogenic macrophages drive cardiac fibrosis via MMP12-mediated tissue remod... GSE292393 Mus musculus	9 samples	archive_table 126 MB	Not in ASAP	Details
geo bulk	Gene expression changes induced by doxycycline-inducible 3xFlag-MORC1 WT and ... GSE314169 Mus musculus	9 samples	archive_table 145 MB	Not in ASAP	Details
geo bulk	The Cd4+ T cell population Partners with Tpex CD8 T cells to mediate Antitumo... GSE312336 Homo sapiens	9 samples	archive_table 156 MB	Not in ASAP	Details
geo bulk	Fibroblast orchestration of inflammaging via NF-kB activation GSE312773 Homo sapiens	9 samples	archive_table 163 MB	Not in ASAP	Details