External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Long read direct RNA-sequencing of mammalian bone marrow derived macrophages ... GSE267147 Mus musculus	10 samples	archive_table 10.7 MB	Not in ASAP	Details
geo bulk	Cross-species identification of DLPFC-specific miR-130a-3p as a causal driver... GSE316217 Mus musculus	10 samples	counts_table 12.9 MB	Not in ASAP	Details
geo bulk	Long-read RNA-seq of human (Homo sapiens), gorilla (Gorilla gorilla), orangut... GSE326106 Homo sapiens; Macaca fascicularis; Pongo abelii; Gorilla gorilla	10 samples	archive_table 14.6 MB	Not in ASAP	Details
geo bulk	Novel transcription factor BTNL9 enhances tumor suppression and drug sensitiv... GSE242320 Homo sapiens	10 samples	archive_table 15.6 MB	Not in ASAP	Details
geo bulk	Development of an AI Model to Predict Tumor Immune Responsiveness in Colorect... GSE297912 Homo sapiens	10 samples	archive_table 16.8 MB	Not in ASAP	Details
geo bulk	Blood vessel-resident macrophages safeguard blood and vessel integrity in zeb... GSE296640 Danio rerio	10 samples	archive_table 17.8 MB	Not in ASAP	Details
geo bulk	Toward a more precise immunophenotypic and molecular definition of human cMoPs GSE303727 Homo sapiens	10 samples	archive_table 27.5 MB	Not in ASAP	Details
geo bulk	Friedreich Ataxia Mice GSE288476 Mus musculus	10 samples	archive_table 32.1 MB	Not in ASAP	Details
geo bulk	Differential adenosine to inosine RNA editing of SINE B2 non-coding RNAs in m... GSE316378 Mus musculus	10 samples	archive_table 33 MB	Not in ASAP	Details
geo bulk	TOX drives TH1 CD4+ T cell effector function, anti-tumor immunity, and pathog... GSE317909 Mus musculus	10 samples	archive_table 36.2 MB	Not in ASAP	Details
geo bulk	One-step knock-in CAR constructs in human NK cells enable scalable, TGFβ1-res... GSE299464 Homo sapiens	10 samples	archive_table 36.7 MB	Not in ASAP	Details
geo bulk	Vacuolar ATPase subunit Atp6v0c transgene promotes neuroprotection and long-d... GSE325128 Mus musculus	10 samples	archive_table 49.3 MB	Not in ASAP	Details
geo bulk	Trans-acting long non-coding RNA modulates long-range chromatin interactions ... GSE270217 Homo sapiens	10 samples	archive_table 49.6 MB	Not in ASAP	Details
geo bulk	Fronto-insular circuit mechanisms of accelerated intermittent theta burst sti... GSE282867 Mus	10 samples	counts_table 57.3 MB	Not in ASAP	Details
geo bulk	Unraveling Hypoxia-Driven Gene and Methylation Signatures in Meningioma: Iden... GSE282352 Homo sapiens	10 samples	archive_table 59.7 MB	Not in ASAP	Details
geo bulk	Remodelling of the bone marrow vasculature induced by venetoclax and azacitid... GSE297754 Mus musculus	10 samples	archive_table 68.6 MB	Not in ASAP	Details
geo bulk	Nociceptive innervation limits tertiary lymphoid structures to promote lung c... GSE302373 Mus musculus	10 samples	archive_table 101 MB	Not in ASAP	Details
geo bulk	Heterogeneity and Clinical Relevance of Group 2 Innate Lymphoid Cells Subsets... GSE324445 Homo sapiens	10 samples	archive_table 106 MB	Not in ASAP	Details
geo bulk	XCR1+ and CD11b+ migratory dendritic cells cooperate for the crosspriming of ... GSE337798 Mus musculus	10 samples	archive_table 127 MB	Not in ASAP	Details
geo bulk	Unraveling age-related cellular and molecular changes associated with vestibu... GSE283708 Mus musculus	10 samples	archive_table 130 MB	Not in ASAP	Details
geo bulk	Atomistic TCR-ligand interactions instruct memory T-cell differentiation and ... GSE302680 Mus musculus	10 samples	archive_table 150 MB	Not in ASAP	Details
geo bulk	Androgen signaling via sympathetic neurons regulates allergic pulmonary infla... GSE287511 Mus musculus	10 samples	archive_table 174 MB	Not in ASAP	Details
geo bulk	A novel CAF population coordinates hyper-suppressive regulatory T cell recrui... GSE303166 Mus musculus	10 samples	archive_table 200 MB	Not in ASAP	Details
geo bulk	Mouse kidney-specific Glut2 knockout GSE332903 Mus musculus	10 samples	archive_table 203 MB	Not in ASAP	Details
geo bulk	MAPK- driven glioma progression and reprogramming of the tumor-associated im... GSE312124 Homo sapiens	10 samples	archive_table 239 MB	Not in ASAP	Details