External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	P21+TREM2+-Senescent Macrophages Fuel Inflammaging and Metabolic Dysfunction-... GSE318652 Mus musculus	11 samples	counts_table 4.32 MB	Not in ASAP	Details
geo bulk	A TROP2-targeting ADC synergizes with oxidative phosphorylation inhibitor to ... GSE304294 Homo sapiens	11 samples	counts_table 4.4 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of mouse colorectal organoids following NAP treatment. GSE324667 Mus musculus	11 samples	counts_table 4.78 MB	Not in ASAP	Details
geo bulk	Elucidating the role of DEAF1 in neurodevelopment and shared molecular pathwa... GSE304228 Homo sapiens	11 samples	counts_table 5.34 MB	Not in ASAP	Details
geo bulk	RRM1 inhibition sensitizes lung adenocarcinoma to decitabine treatment GSE292076 Homo sapiens	11 samples	counts_table 7.02 MB	Not in ASAP	Details
geo bulk	SMARCA4, STK11, and KEAP1 co-loss associates with poor prognosis and upregula... GSE299604 Homo sapiens	11 samples	counts_table 8.23 MB	Not in ASAP	Details
geo bulk	Limonin ameliorates metabolic dysfunction-associated steatohepatitis in mice GSE328199 Mus musculus	11 samples	counts_table 8.62 MB	Not in ASAP	Details
geo bulk	RFX5 Mediates High-order Structures to Regulate Cancer Progression-Associated... GSE305793 Homo sapiens	11 samples	archive_table 9.19 MB	Not in ASAP	Details
geo bulk	CGRP signaling Links Tumor-Associated Pain to Immune Evasion in Oral Squamous... GSE315799 Mus musculus	11 samples	archive_table 14.1 MB	Not in ASAP	Details
geo bulk	Epigenetic landscape, key transcriptional regulators, and in vivo identificat... GSE333496 Homo sapiens	11 samples	archive_table 25.1 MB	Not in ASAP	Details
geo bulk	A covalent fragment screen identifies ferroptosis induced by GPX4 inhibition ... GSE307575 Homo sapiens	11 samples	archive_table 35.4 MB	Not in ASAP	Details
geo bulk	Targeted KRAS G12V degradation elicits efficient and durable lung adenocarcin... GSE326057 Mus musculus	11 samples	archive_table 41.7 MB	Not in ASAP	Details
geo bulk	Multiomics immune profiling of a patient-relevant orthotopic lung cancer mode... GSE304864 Mus musculus	11 samples	archive_table 123 MB	Not in ASAP	Details
geo bulk	ΔNp73 isoform defines a TP53mutant-like poor risk subgroup of acute myeloid l... GSE310074 Homo sapiens	11 samples	archive_table 194 MB	Not in ASAP	Details
geo bulk	Distinct phenotypes and repertoires of bronchoalveolar and airway mucosal T c... GSE297584 Homo sapiens	11 samples	archive_table 200 MB	Not in ASAP	Details
geo bulk	Dominant Malignant Clones Leverage Lineage Restricted Epigenomic Programs to ... GSE314599 Mus musculus	11 samples	archive_table 229 MB	Not in ASAP	Details
geo bulk	Combining ASCL1 and NEUROD1 reprograms human RPE into neurons of distinct lin... GSE328663 Homo sapiens	11 samples	archive_table 355 MB	Not in ASAP	Details
geo bulk	Evolutionarily conserved epigenetic regulation of transcriptional cell states... GSE343774 Danio rerio	11 samples	archive_table 448 MB	Not in ASAP	Details
geo bulk	Topology-informed regulatory element collections coordinate cell identity gen... GSE254728 Mus musculus	11 samples	archive_table 478 MB	Not in ASAP	Details
geo bulk	Fatty acid ethanolamides-producing gut bacteria alleviate gastrointestinal sy... GSE331364 Mus musculus	11 samples	archive_table 487 MB	Not in ASAP	Details
geo bulk	Disease-associated microglia adopt stage-specific phenotypes that regulate T ... GSE171081 Mus musculus	11 samples	archive_table 503 MB	Not in ASAP	Details
geo bulk	The Heme-regulated transcriptional repressor, BACH1 safeguards macrophage enh... GSE245649 Mus musculus	11 samples	archive_table 521 MB	Not in ASAP	Details
geo bulk	Cumulative developmental perturbations alter adult male behaviour associated ... GSE289585 Mus musculus	11 samples	archive_table 535 MB	Not in ASAP	Details
geo bulk	Impairment of hippocampal gamma oscillations, mitochondria and neurovascular ... GSE300114 Mus musculus	11 samples	archive_table 566 MB	Not in ASAP	Details
geo bulk	Heterochromatin spreading in cancer cells through HDAC7 mediated histone H3.3... GSE286178 Homo sapiens	11 samples	archive_table 608 MB	Not in ASAP	Details