External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Optineurin depletion in dendritic cells GSE139175 Mus musculus	2 samples	counts_table 4.18 MB	Not in ASAP	Details
geo bulk	Proteome-scale tagging and functional screening in mammalian cells by ORFtag ... GSE267111 Mus musculus	2 samples	archive_table 4.21 MB	Not in ASAP	Details
geo bulk	The Zeb1-Cxcl1 axis impairs the antitumor immune response by inducing M2 macr... GSE248418 Homo sapiens	2 samples	archive_table 4.22 MB	Not in ASAP	Details
geo bulk	LncRNA WEE1-AS coordinates oxidative fatty acid metabolism through the activa... GSE289618 Mus musculus	2 samples	counts_table 4.24 MB	Not in ASAP	Details
geo bulk	Application of machine learning (ML) / deep learning (DL) using multiple epig... GSE296945 Homo sapiens	2 samples	archive_table 4.25 MB	Not in ASAP	Details
geo bulk	Structures of Naked Mole-Rat, Tuco-Tuco, and Guinea Pig Ribosomes: Is rRNA Fr... GSE306918 Ctenomys talarum	2 samples	archive_table 4.28 MB	Not in ASAP	Details
geo bulk	HFSF co-cultured with blue light exposed RPE medium GSE162625 Homo sapiens	2 samples	archive_table 4.28 MB	Not in ASAP	Details
geo bulk	Polyadenylation site mapping of xrn1∆ in Sacchromyces cerevisiae GSE158548 Saccharomyces cerevisiae	2 samples	archive_table 4.29 MB	Not in ASAP	Details
geo bulk	Differential expressed genes in WT and SCRN1 KO HepG2 cells. GSE250086 Homo sapiens	2 samples	archive_table 4.29 MB	Not in ASAP	Details
geo bulk	Bulk Sequencing of CD45- cells from HD and SSc patients GSE202649 Homo sapiens	2 samples	archive_table 4.32 MB	Not in ASAP	Details
geo bulk	Use of synthetic circular RNA spike-ins (SynCRS) for normalization of circula... GSE261809 Homo sapiens	2 samples	archive_table 4.38 MB	Not in ASAP	Details
geo bulk	Positive auto-feedback regulation of Ptf1a transcription generates the levels... GSE146238 Mus musculus	2 samples	counts_table 4.43 MB	Not in ASAP	Details
geo bulk	Next Generation Sequencing analysis of the global expression profiling in bon... GSE290075 Mus musculus	2 samples	counts_table 4.46 MB	Not in ASAP	Details
geo bulk	Transcriptome analysis of lateral buds from Phyllostachys edulis rhizome duri... GSE142030 Phyllostachys edulis	2 samples	archive_table 4.53 MB	Not in ASAP	Details
geo bulk	Analysis of m6A modification-related regulators in Ara-C-resistant cells and ... GSE212207 Homo sapiens	2 samples	counts_table 4.55 MB	Not in ASAP	Details
geo bulk	New insights into benzo[⍺]pyrene osteotoxicity in zebrafish GSE174529 Danio rerio	2 samples	counts_table 4.58 MB	Not in ASAP	Details
geo bulk	Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils... GSE235559 Saccharomyces cerevisiae	2 samples	archive_table 4.66 MB	Not in ASAP	Details
geo bulk	LncRNA DCRT protects against dilated cardiomyopathy via binding to PTBP1 (Iso... GSE243738 Homo sapiens	2 samples	archive_table 4.69 MB	Not in ASAP	Details
geo bulk	Characterization of gene expression noise modulated by microRNA GSE164080 Homo sapiens	2 samples	archive_table 4.75 MB	Not in ASAP	Details
geo bulk	RNA-seq of human lens with cataracts, alopecia, & microdontia GSE124121 Homo sapiens	2 samples	archive_table 4.8 MB	Not in ASAP	Details
geo bulk	Matrix Selection for the Visualization of Small Molecules and Lipids in Brain... GSE279139 Mus musculus	2 samples	archive_table 4.82 MB	Not in ASAP	Details
geo bulk	RNA-seq of human pediatric cornea presenting with CCO GSE162236 Homo sapiens	2 samples	archive_table 4.84 MB	Not in ASAP	Details
geo bulk	Identifying brain-penetrant small-molecule modulators of human microglia usin... GSE297703 Homo sapiens	2 samples	counts_table 4.87 MB	Not in ASAP	Details
geo bulk	Effect of myeloid specific rictor knockout on B16-F10 tumors grown in mice GSE300928 Mus musculus	2 samples	archive_table 4.89 MB	Not in ASAP	Details
geo bulk	Digital RNA with pertUrbation of Genes (DRUG-Seq) of LN-229 glioblastoma cell... GSE214965 Homo sapiens	2 samples	counts_table 5.06 MB	Not in ASAP	Details