External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Impaired synthesis of both telomere strands and adaptive TERT reduction in RT... GSE338949 Homo sapiens	12 samples	counts_table 1.27 MB	Not in ASAP	Details
geo bulk	The ubiquitin ligase CBL and Fas-associated factor 2 cooperate to regulate th... GSE314067 Homo sapiens	12 samples	counts_table 1.27 MB	Not in ASAP	Details
geo bulk	RNA-seq of RSV-Infected THP-1 Cells Treated with Recombinant CTSC GSE296019 Homo sapiens	12 samples	archive_table 1.28 MB	Not in ASAP	Details
geo bulk	Loss of TET function in T regulatory cells yields ex-Treg cells biased toward... GSE325544 Mus musculus	12 samples	archive_table 1.28 MB	Not in ASAP	Details
geo bulk	RNA-seq data of PEPD over-expressed vs NC GBM cells GSE315227 Homo sapiens	12 samples	counts_table 1.29 MB	Not in ASAP	Details
geo bulk	Establishment and characterization of lymph node fibrosis mouse model via dua... GSE330392 Mus musculus	12 samples	counts_table 1.3 MB	Not in ASAP	Details
geo bulk	Pan-SNCA vs. isoform-selective antisense oligonucleotide knockdown of SNCA-dI... GSE342033 Homo sapiens	12 samples	counts_table 1.31 MB	Not in ASAP	Details
geo bulk	A pathogenic alpha synuclein variant exacerabtes disease progression in a neu... GSE289837 Mus musculus	12 samples	counts_table 1.32 MB	Not in ASAP	Details
geo bulk	DPP4 inhibition affects metabolism and inflammation associated pathways in hi... GSE310216 Homo sapiens	12 samples	counts_table 1.32 MB	Not in ASAP	Details
geo bulk	Synaptic effects of interleukin-6 on human iPSC-derived dopaminergic neurons GSE296202 Homo sapiens	12 samples	counts_table 1.33 MB	Not in ASAP	Details
geo bulk	BAFF-R Expression as a Predictive Biomarker for COVID-19 Vaccine Non-Responsi... GSE298709 Homo sapiens	12 samples	counts_table 1.34 MB	Not in ASAP	Details
geo bulk	ATR Is a Critical Dependency Gene Supporting Uveal Melanoma Cell Survival GSE317502 Homo sapiens	12 samples	counts_table 1.35 MB	Not in ASAP	Details
geo bulk	Aging-declined RNA Exportation Impairs Hematopoietic Stem Cells by Inducing R... GSE239300 Mus musculus	12 samples	counts_table 1.35 MB	Not in ASAP	Details
geo bulk	Degenerate long-range interactions drive phase transition of heterochromatin ... GSE271747 Caenorhabditis elegans	12 samples	counts_table 1.35 MB	Not in ASAP	Details
geo bulk	Somatic Mutations in MCOLN3 Are Associated with Aldosterone-Producing Adenomas GSE299739 Homo sapiens	12 samples	counts_table 1.36 MB	Not in ASAP	Details
geo bulk	Trans-regulation of heterochromatin underlies genetic variation in 3D genome ... GSE324129 Mus musculus	12 samples	counts_table 1.37 MB	Not in ASAP	Details
geo bulk	RNA-seq in C4.2B prostate cancer cell line treated with AKTi (ipatasertib) an... GSE297894 Homo sapiens	12 samples	counts_table 1.38 MB	Not in ASAP	Details
geo bulk	An mRNA vaccine confers enhanced protection against herpes sim-plex virus thr... GSE322599 Mus musculus	12 samples	counts_table 1.39 MB	Not in ASAP	Details
geo bulk	The role of TPM1 isoform1.1 and 1.6 on global splicing events of mice heart GSE313175 Mus musculus	12 samples	counts_table 1.39 MB	Not in ASAP	Details
geo bulk	LPS-Mediated Transcriptional Changes in Myeloid Lineage Cells: Macrophages a... GSE298028 Mus musculus	12 samples	counts_table 1.39 MB	Not in ASAP	Details
geo bulk	Deep learning identifies Pbx1 as a network hub of hematopoietic stem cell agi... GSE286961 Mus musculus	12 samples	counts_table 1.4 MB	Not in ASAP	Details
geo bulk	Plasminogen small RNA cargo promotes immunogenicity and inhibits enzymatic ac... GSE288432 Mus musculus	12 samples	counts_table 1.4 MB	Not in ASAP	Details
geo bulk	Intestinal lipase inhibition uncouples diet-induced obesity from MASH by remo... GSE333221 Mus musculus	12 samples	counts_table 1.41 MB	Not in ASAP	Details
geo bulk	Editing of SlMYB60 Reveals a Role in Cuticle Formation in Tomato GSE319218 Solanum lycopersicum	12 samples	counts_table 1.41 MB	Not in ASAP	Details
geo bulk	Dendritic cells accelerate CAR T cells in irradiated tumors through chimeric ... GSE263352 Mus musculus	12 samples	counts_table 1.42 MB	Not in ASAP	Details