External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Analysis of Host and Microbiome Responses to Antibiotics Reveals Microbiota-I... GSE324684 Rattus norvegicus	12 samples	counts_table 1.58 MB	Not in ASAP	Details
geo bulk	Replication-independent eviction of H2B.8 reveals large-scale chromatin repro... GSE304462 Arabidopsis thaliana	12 samples	counts_table 1.59 MB	Not in ASAP	Details
geo bulk	Patient-derived airway organoids from BAL fluid model injury and therapy resp... GSE304202 Homo sapiens	12 samples	counts_table 1.59 MB	Not in ASAP	Details
geo bulk	Reprogramming Dedifferentiation Regulatory Networks Preserves Human Chondrocy... GSE327285 Homo sapiens	12 samples	counts_table 1.59 MB	Not in ASAP	Details
geo bulk	Short-term toxic effects of Potassium peroxymonosulfate on Chlorella pyrenoid... GSE329214 Auxenochlorella pyrenoidosa	12 samples	counts_table 1.59 MB	Not in ASAP	Details
geo bulk	PAX3-SIX2 muscle stem cell heterogeneity drives muscle-specific repair dynami... GSE325703 Mus musculus	12 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	Transcriptional analysis of the bifocal HCCs GSE231338 Homo sapiens	12 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	Extracellular vesicles derived from pro-inflammatory M1 macrophages induce an... GSE305018 Homo sapiens	12 samples	counts_table 1.61 MB	Not in ASAP	Details
geo bulk	Short-term toxic effects of Potassium peroxymonosulfate on Chlorella pyrenoid... GSE330137 Auxenochlorella pyrenoidosa	12 samples	counts_table 1.61 MB	Not in ASAP	Details
geo bulk	Effect of COQ6 D316Y homozygosity on BMDM transcriptome GSE226704 Mus musculus	12 samples	counts_table 1.61 MB	Not in ASAP	Details
geo bulk	Transcriptomic analysis of hippocampus and prefrontal cortex in a mouse model... GSE331524 Mus musculus	12 samples	archive_table 1.62 MB	Not in ASAP	Details
geo bulk	A tunable immune-evasion function of Zika virus NS5 governs viral fitness and... GSE344436 Homo sapiens	12 samples	counts_table 1.63 MB	Not in ASAP	Details
geo bulk	JUN is a master mediator of resistance to MAPK pathway inhibition in KRAS-mut... GSE303578 Homo sapiens	12 samples	counts_table 1.63 MB	Not in ASAP	Details
geo bulk	Myeloid dickkopf-1 fuels neurovascular and neuroimmune alterations in ischemi... GSE237227 Mus musculus	12 samples	counts_table 1.63 MB	Not in ASAP	Details
geo bulk	NELFA-mediated promoter-proximal pausing restrains YAP-driven transcription a... GSE311396 Homo sapiens	12 samples	counts_table 1.64 MB	Not in ASAP	Details
geo bulk	ZMAT3 alleviates cell death in Fanconi anemia via adaptation of sphingolipid ... GSE308873 Homo sapiens	12 samples	counts_table 1.65 MB	Not in ASAP	Details
geo bulk	Particle Reprogramming of the TLR–Ferroptosis Axis and Immunometabolic Pathwa... GSE319419 Mus musculus	12 samples	counts_table 1.65 MB	Not in ASAP	Details
geo bulk	Vanin-1 deficiency enhances host tolerance to influenza infection by modulati... GSE298514 Mus musculus	12 samples	counts_table 1.66 MB	Not in ASAP	Details
geo bulk	Co-targeting CDK7/CDK9 and CKIα exerts efficacious anticancer effects against... GSE262443 Homo sapiens	12 samples	counts_table 1.67 MB	Not in ASAP	Details
geo bulk	Laminaria japonica Polysaccharide Mitigates Acute Neuroinflammation in Cerebr... GSE328360 Mus musculus	12 samples	counts_table 1.67 MB	Not in ASAP	Details
geo bulk	The NAMPT/SIRT7/SOD2 axis regulates alveolar progenitor cell renewal and pulm... GSE295740 Homo sapiens	12 samples	counts_table 1.67 MB	Not in ASAP	Details
geo bulk	Patient-derived airway organoids from BAL fluid model injury and therapy resp... GSE304208 Homo sapiens	12 samples	counts_table 1.68 MB	Not in ASAP	Details
geo bulk	Drosophila melanogaster lactate dehydrogenase deficiency recapitulates the ex... GSE337893 Drosophila melanogaster	12 samples	counts_table 1.69 MB	Not in ASAP	Details
geo bulk	Transcriptional Effects of 6-Shogaol and 6-Gingerol in LPS-Stimulated BV2 Mic... GSE336398 Mus musculus	12 samples	counts_table 1.69 MB	Not in ASAP	Details
geo bulk	Effects of adenovirus mediated GLA expression on gene expression of hiPSC-de... GSE327944 Homo sapiens	12 samples	counts_table 1.7 MB	Not in ASAP	Details