External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Effects of PAX8 depletion on gene expression in proximal tubule epithelial ce... GSE317089 Mus musculus	12 samples	counts_table 1.7 MB	Not in ASAP	Details
geo bulk	Targeting UGCG sensitizes AML cells to Venetoclax through RAB32-mediated endo... GSE315549 Homo sapiens	12 samples	counts_table 1.71 MB	Not in ASAP	Details
geo bulk	Nuclear class 3 PI3K co-activates fasting-specific chromatin remodeling GSE320350 Mus musculus	12 samples	counts_table 1.71 MB	Not in ASAP	Details
geo bulk	Comparative transcriptomics reveals differences mainly in magnitude, not patt... GSE315930 Dactylorhiza majalis	12 samples	counts_table 1.72 MB	Not in ASAP	Details
geo bulk	Mitochondrial metabolism and epigenetic crosstalk drive the SASP (RNA-Seq) GSE279411 Homo sapiens	12 samples	counts_table 1.74 MB	Not in ASAP	Details
geo bulk	Gene expression profiles of intestinal organoids under collagen/Matrigel cult... GSE310408 Homo sapiens	12 samples	counts_table 1.74 MB	Not in ASAP	Details
geo bulk	Rewiring miR-22/SNAI1 via CRISPR-Based Edge Editing Destabilizes the Epitheli... GSE300529 Homo sapiens	12 samples	counts_table 1.76 MB	Not in ASAP	Details
geo bulk	Loss of endothelial ALK1 signaling induces the emergence of a KIT+ angiogenic... GSE328234 Mus musculus	12 samples	counts_table 1.76 MB	Not in ASAP	Details
geo bulk	Boldine treatment prevents chronic cognitive impairment and exaggerated fear ... GSE338885 Rattus norvegicus	12 samples	counts_table 1.77 MB	Not in ASAP	Details
geo bulk	Expression data from rank-deficient Danio rerio intestines GSE303709 Danio rerio	12 samples	counts_table 1.77 MB	Not in ASAP	Details
geo bulk	Effects of ascites exposure from ovarian cancer on epithelial cancer cell lines GSE281415 Homo sapiens	12 samples	archive_table 1.78 MB	Not in ASAP	Details
geo bulk	RNA-seq of PRSS23 knockdown in ovarian cancer cell lines JHOC-5 and OVCA420 GSE315399 Homo sapiens	12 samples	counts_table 1.78 MB	Not in ASAP	Details
geo bulk	Activating GCN2 and subsequently the Unfolded Protein Response with the small... GSE283602 Homo sapiens	12 samples	archive_table 1.8 MB	Not in ASAP	Details
geo bulk	Effect of intravenous poly(lactide-co-glycolide) nanoparticles on bleomycin p... GSE336548 Mus musculus	12 samples	counts_table 1.8 MB	Not in ASAP	Details
geo bulk	Dynamic Reprogramming of Stromal Pdgfra-expressing cells during WNT-Mediated ... GSE287341 Mus musculus	12 samples	counts_table 1.81 MB	Not in ASAP	Details
geo bulk	Transcriptomic profile of Chronic Hepatitis B patients positive for pregenomi... GSE316961 Homo sapiens	12 samples	archive_table 1.82 MB	Not in ASAP	Details
geo bulk	Scap Stabilizes PKM2 to Promote Glycolysis and Enhance Antifungal Immunity in... GSE288513 Mus musculus	12 samples	counts_table 1.82 MB	Not in ASAP	Details
geo bulk	Decoupled glucose- and glutamine-dependent orthogonal metabolic states indepe... GSE317435 Homo sapiens	12 samples	counts_table 1.82 MB	Not in ASAP	Details
geo bulk	Topical Vascular Organoid Therapy Promotes Microvascular Regeneration and Fun... GSE333973 Sus scrofa	12 samples	archive_table 1.84 MB	Not in ASAP	Details
geo bulk	Photoproximity labeling of c-Myc reveals SLK as a cancer-specific co-regulato... GSE330346 Homo sapiens	12 samples	counts_table 1.84 MB	Not in ASAP	Details
geo bulk	Cardiac fibroblast deletion of PTBP1 modulates the profibrotic response by al... GSE287133 Mus musculus	12 samples	counts_table 1.86 MB	Not in ASAP	Details
geo bulk	Transcriptome profiling of B-cell lymphoma cells with pharmacological inhibit... GSE310839 Homo sapiens	12 samples	counts_table 1.86 MB	Not in ASAP	Details
geo bulk	An aging-sensitive compensatory neuroprotective factor that confers cognitive... GSE261906 Mus musculus	12 samples	counts_table 1.87 MB	Not in ASAP	Details
geo bulk	Heterologous Prime-Boost Immunization of AAV-based Neoantigen Cancer Vaccine ... GSE292434 Mus musculus	12 samples	counts_table 1.88 MB	Not in ASAP	Details
geo bulk	Polycomb Repressive Complex 1 Primes Non-Growing Oocytes for Growth and Early... GSE280638 Mus musculus	12 samples	counts_table 1.89 MB	Not in ASAP	Details