External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Itga8+ MSCs in the endosteal niche contribute to the maintenance of hematopoi... GSE280158 Mus musculus	12 samples	archive_table 2.47 MB	Not in ASAP	Details
geo bulk	Epicardial-derived cells secrete extracellular vesicles that modulate gene ex... GSE300518 Homo sapiens	12 samples	counts_table 2.48 MB	Not in ASAP	Details
geo bulk	Humanized mice carrying a pathogenic GRN deletion as a pre-clinical platform ... GSE328109 Mus musculus	12 samples	counts_table 2.49 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of osteoblasts on hydroxyapatite-coated surfaces rev... GSE309449 Homo sapiens	12 samples	counts_table 2.49 MB	Not in ASAP	Details
geo bulk	Highlights of Tuft Cells in Mouse and Human Salivary Glands GSE320144 Mus musculus	12 samples	counts_table 2.5 MB	Not in ASAP	Details
geo bulk	Systematic characterization of brain cellular crosstalk reveals a novel role ... GSE226507 Homo sapiens	12 samples	counts_table 2.5 MB	Not in ASAP	Details
geo bulk	Faf2 is required for neural differentiation in embryonic neural progenitor cells GSE338508 Mus musculus	12 samples	counts_table 2.5 MB	Not in ASAP	Details
geo bulk	PAMD-Ch17, a Polymeric Analog of Plerixafor, Induces Mitochondrial Dysfunctio... GSE290704 Homo sapiens	12 samples	counts_table 2.51 MB	Not in ASAP	Details
geo bulk	Comparative Analysis of Oral and Skin Keratinocytes Responses to Oxidative St... GSE308958 Homo sapiens	12 samples	counts_table 2.52 MB	Not in ASAP	Details
geo bulk	Editing of the of the gene model underlying the major protein quantitative tr... GSE300521 Glycine max	12 samples	archive_table 2.54 MB	Not in ASAP	Details
geo bulk	KLF4/MLL3 axis Drives NRBP2 Transcription to Eliminate Acute Myeloid Leukemia... GSE306746 Homo sapiens	12 samples	counts_table 2.54 MB	Not in ASAP	Details
geo bulk	Nobiletin targets USP5 to inhibit ferroptosis and alleviate doxorubicin-induc... GSE344097 Rattus norvegicus	12 samples	counts_table 2.54 MB	Not in ASAP	Details
geo bulk	Transcriptomic profiles of Huh7 and HLF hepatocellular carcinoma cells under ... GSE298810 Homo sapiens	12 samples	counts_table 2.55 MB	Not in ASAP	Details
geo bulk	Gene expression profile of Eµ-myc lymphoma cells in cell culture and sorted f... GSE308962 Mus musculus	12 samples	archive_table 2.56 MB	Not in ASAP	Details
geo bulk	Next Generation Sequencing Analysis of Breast Cancer Cell Line MCF-7 And MDA-... GSE221833 Homo sapiens	12 samples	archive_table 2.56 MB	Not in ASAP	Details
geo bulk	Engineering hematopoietic stem and progenitor cells to generate red blood cel... GSE338343 Homo sapiens	12 samples	counts_table 2.59 MB	Not in ASAP	Details
geo bulk	Gene expression profile of NK cells sorted from the lymph node of tumor free ... GSE308924 Mus musculus	12 samples	archive_table 2.6 MB	Not in ASAP	Details
geo bulk	Assessment of the effect of CLDN1 knockout in cholangiocarcinoma cells in vivo GSE312711 Homo sapiens	12 samples	counts_table 2.6 MB	Not in ASAP	Details
geo bulk	RNA-seq analysis of human peripheral blood Treg cells stratified into four eq... GSE325333 Homo sapiens	12 samples	archive_table 2.69 MB	Not in ASAP	Details
geo bulk	ROS-sensing Transcription Factor YchJ Regulates RssB-RpoS Pathway to Protect ... GSE326704 Mus musculus; Salmonella enterica	12 samples	counts_table 2.69 MB	Not in ASAP	Details
geo bulk	DSS chronic colitis induces osteoporosis by changing osteal macrophages to an... GSE295136 Mus musculus	12 samples	counts_table 2.78 MB	Not in ASAP	Details
geo bulk	PI3K-AKT activation determines oncogenic RAS-induced hypertranscription and r... GSE322524 Homo sapiens	12 samples	counts_table 2.8 MB	Not in ASAP	Details
geo bulk	PI3K and MAPK signaling nodes as divergent drivers of phenotypic plasticity i... GSE309233 Homo sapiens	12 samples	archive_table 2.81 MB	Not in ASAP	Details
geo bulk	Folic acid drives metabolic reprogramming to alleviate Toxoplasma gondii anti... GSE294165 Homo sapiens	12 samples	counts_table 2.83 MB	Not in ASAP	Details
geo bulk	Long-read isoform sequencing reveals Aroclor1260-induced isoform expression i... GSE308889 Mus musculus	12 samples	counts_table 2.84 MB	Not in ASAP	Details