External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	DNMT3B drives neuroendocrine lineage plasticity and aggressive progression in... GSE302864 Homo sapiens	12 samples	archive_table 2.86 MB	Not in ASAP	Details
geo bulk	Bulk RNA-seq of HCT116 colorectal cancer 3D spheroids treated with 5-fluorour... GSE343958 Homo sapiens	12 samples	counts_table 2.86 MB	Not in ASAP	Details
geo bulk	Sequencing analysis of artificial decidual uterus in mice GSE286131 Mus musculus	12 samples	archive_table 2.89 MB	Not in ASAP	Details
geo bulk	Comparison of FOLR2-negative and FOLR2-positive human decidual macrophages at... GSE337384 Homo sapiens	12 samples	counts_table 2.91 MB	Not in ASAP	Details
geo bulk	Decoding plant defense signaling using the defenseless mutant GSE299572 Arabidopsis thaliana	12 samples	archive_table 2.92 MB	Not in ASAP	Details
geo bulk	CENPF overexpression facilitates the G1/S cell cycle transition of hepatocell... GSE319803 Homo sapiens	12 samples	archive_table 2.97 MB	Not in ASAP	Details
geo bulk	Noncoding SNP rs17728461 regulates the malignant progression of lung cancer [... GSE284337 Homo sapiens	12 samples	counts_table 2.98 MB	Not in ASAP	Details
geo bulk	Outer membrane remodeling via lipid-peptidoglycan crosstalk enables lipooligo... GSE314574 Acinetobacter baumannii	12 samples	archive_table 3.04 MB	Not in ASAP	Details
geo bulk	Elucidating the molecular mechanisms underlying CRB1-related Leber congenital... GSE235778 Homo sapiens	12 samples	counts_table 3.06 MB	Not in ASAP	Details
geo bulk	Protective effects of metformin against ponatinib-induced toxicity in iPSC-de... GSE312602 Homo sapiens	12 samples	archive_table 3.06 MB	Not in ASAP	Details
geo bulk	DICER1 dysregulation triggers miRNA reprogramming, promotes mesenchymal cell ... GSE299101 Homo sapiens	12 samples	archive_table 3.06 MB	Not in ASAP	Details
geo bulk	Cellular Crosstalk Drives Hypertrophic Cardiomyopathy in LZTR1 Deficiency GSE271775 Homo sapiens	12 samples	archive_table 3.07 MB	Not in ASAP	Details
geo bulk	RNA sequencing analysis of cells infected with chimeric EV-A71 strains in whi... GSE317117 Homo sapiens	12 samples	archive_table 3.1 MB	Not in ASAP	Details
geo bulk	Bulk liver mRNA-seq of Cep72 knockout and wild-type mice in Schistosoma japon... GSE318357 Mus musculus	12 samples	archive_table 3.11 MB	Not in ASAP	Details
geo bulk	An EGFR Co-amplified Long Noncoding RNA HELDR Promotes Glioblastoma Malignanc... GSE286318 Homo sapiens	12 samples	archive_table 3.11 MB	Not in ASAP	Details
geo bulk	Nociceptor clock genes control excitability and pain perception in a sex and ... GSE295356 Mus musculus	12 samples	counts_table 3.11 MB	Not in ASAP	Details
geo bulk	HERC5-HSP60 ISGylation Axis Sustains Mitochondrial Homeostasis in Glioblastom... GSE304023 Homo sapiens	12 samples	counts_table 3.11 MB	Not in ASAP	Details
geo bulk	Elevated Ozone Activates Maternal Immunity to Drive Offspring IgG-Mediated An... GSE296733 Mus musculus	12 samples	archive_table 3.13 MB	Not in ASAP	Details
geo bulk	Transcriptome data (mRNA-seq) for NiP, ehd3-1, sdg724-1, and ehd3 sdg724. GSE266906 Oryza sativa	12 samples	counts_table 3.14 MB	Not in ASAP	Details
geo bulk	Profiling the novel impacts of the organochlorine compounds tris(4-chlorophen... GSE338198 Homo sapiens	12 samples	archive_table 3.14 MB	Not in ASAP	Details
geo bulk	RNA-seq profiling of L4-stage Caenorhabditis elegans exposed to AO168=O at en... GSE329157 Caenorhabditis elegans	12 samples	counts_table 3.19 MB	Not in ASAP	Details
geo bulk	Regulation of the transcription cycle contributes to BET bromodomain inhibito... GSE268320 Homo sapiens	12 samples	counts_table 3.28 MB	Not in ASAP	Details
geo bulk	m6A epitranscriptome regulates axonogenesis and reprogramming of retinal gang... GSE305554 Mus musculus	12 samples	counts_table 3.29 MB	Not in ASAP	Details
geo bulk	Hypoxia-induced FTO nuclear export promotes m6A-dependent NMNAT3 mRNA stabili... GSE342567 Sus scrofa	12 samples	counts_table 3.31 MB	Not in ASAP	Details
geo bulk	The FOSB-IGFBP5-IGF-1 Axis: A Novel Regulatory Pathway that Suppresses Prosta... GSE304134 Homo sapiens	12 samples	counts_table 3.34 MB	Not in ASAP	Details