External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Roles of RNF213 in temporal resonse to palmitate in HeLa cells GSE310980 Homo sapiens	12 samples	archive_table 6.99 MB	Not in ASAP	Details
geo bulk	HyDRA: a pipeline for integrating long- and short-read RNAseq data for custom... GSE327033 Homo sapiens	12 samples	counts_table 7 MB	Not in ASAP	Details
geo bulk	Enhanced efficacy of a specific HDAC3 inhibitor in combination with 5-Azaciti... GSE310305 Homo sapiens	12 samples	counts_table 7.09 MB	Not in ASAP	Details
geo bulk	GATA3 Differentially Regulates the Transcriptome via Its Zinc Finger 2-Modula... GSE289230 Homo sapiens	12 samples	counts_table 7.17 MB	Not in ASAP	Details
geo bulk	Hypoxia induced alternative splicing transcript DGKG Δ exon13 promotes gliobl... GSE275660 Homo sapiens	12 samples	counts_table 7.22 MB	Not in ASAP	Details
geo bulk	Knockdown of TRIM35 supresses cell proliferation, metastasis, and glycolysis... GSE308716 Homo sapiens	12 samples	counts_table 7.26 MB	Not in ASAP	Details
geo bulk	Mitochondrial redox homeostasis links organellar stress surveillance to germl... GSE311484 Caenorhabditis elegans	12 samples	archive_table 7.37 MB	Not in ASAP	Details
geo bulk	Transcriptome profiling of human normal liver and hepatocellular carcinoma ti... GSE312183 Homo sapiens	12 samples	archive_table 7.37 MB	Not in ASAP	Details
geo bulk	Phenotypic effects of disruption of all four rice HK cytokinin receptors GSE295707 Oryza sativa	12 samples	archive_table 7.6 MB	Not in ASAP	Details
geo bulk	ZIC2 affects oral squamous cell carcinoma stemness by regulating glycerophosp... GSE304366 Homo sapiens	12 samples	counts_table 7.62 MB	Not in ASAP	Details
geo bulk	E96A TMZ Treatment Study GSE311738 Homo sapiens	12 samples	counts_table 7.65 MB	Not in ASAP	Details
geo bulk	Correcting the immune microenvironment disturbed by the overactivation of the... GSE325169 Mus musculus	12 samples	counts_table 7.8 MB	Not in ASAP	Details
geo bulk	The role of Akh in the systemic gene expression changes induced by Drosophila... GSE326139 Drosophila melanogaster	12 samples	counts_table 7.85 MB	Not in ASAP	Details
geo bulk	Gene expression analysis of Subperitoneal Fibroblast (SPF) by knockdown of Tr... GSE281727 Homo sapiens	12 samples	counts_table 7.87 MB	Not in ASAP	Details
geo bulk	RSK1 reprograms the ubiquitin pathway to promote immune suppression GSE305014 Mus musculus	12 samples	counts_table 7.91 MB	Not in ASAP	Details
geo bulk	Transcriptional profiling of isolated T cells of healthy individuals after tr... GSE277708 Homo sapiens	12 samples	counts_table 7.94 MB	Not in ASAP	Details
geo bulk	Targeting the TNFα/TNFR1 axis to alleviate inflammation in experimental acute... GSE306650 Mus musculus	12 samples	counts_table 8.05 MB	Not in ASAP	Details
geo bulk	Effect of MSCs or tpMSCs on gene expression in hypoxia/LPS-induced dilated ac... GSE327991 Mus musculus	12 samples	counts_table 8.14 MB	Not in ASAP	Details
geo bulk	A Senescent Tumor Cell-Derived Nanovesicle Directly Primes Splenic T cells to... GSE306978 Mus musculus	12 samples	counts_table 8.23 MB	Not in ASAP	Details
geo bulk	AT2-specific knockout of SLC39A1 in murine model of acute lung injury GSE245055 Mus musculus	12 samples	counts_table 8.4 MB	Not in ASAP	Details
geo bulk	The role of Snail1 in collective migration GSE296475 Mus musculus	12 samples	counts_table 8.46 MB	Not in ASAP	Details
geo bulk	Engineering perfusable vascular networks in organoids-on-chip [bulk RNA-seq] GSE295400 Homo sapiens	12 samples	archive_table 8.53 MB	Not in ASAP	Details
geo bulk	Features of Group 3-like medulloblastoma mouse model [RNA-Seq] GSE292964 Mus musculus	12 samples	archive_table 8.58 MB	Not in ASAP	Details
geo bulk	Peripheral blood bulk RNA-seq validation cohort for chronic antibody-mediated... GSE334922 Homo sapiens	12 samples	archive_table 8.69 MB	Not in ASAP	Details
geo bulk	Detachment-induced gene expression changes in four lung adenocarcinoma cell l... GSE319718 Homo sapiens	12 samples	counts_table 8.7 MB	Not in ASAP	Details