External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Expansion of human iPSC-derived ureteric bud organoids with repeated branchin... GSE152470 Homo sapiens	2 samples	counts_table 6.91 MB	Not in ASAP	Details
geo bulk	A distinct mechanism of m6A methylation of mRNA in bacteria compared to eukar... GSE281945 Escherichia coli	2 samples	archive_table 6.96 MB	Not in ASAP	Details
geo bulk	Early RNA sequencing of human monocytes in presence of Candida albicans GSE138681 Homo sapiens	2 samples	counts_table 7.1 MB	Not in ASAP	Details
geo bulk	Distribution of Small RNAs Along Transposable Elements in Vitis vinifera Duri... GSE150881 Vitis vinifera	2 samples	archive_table 7.17 MB	Not in ASAP	Details
geo bulk	Valbenazine promotes body growth via growth hormone signaling during zebrafis... GSE232468 Danio rerio	2 samples	archive_table 7.25 MB	Not in ASAP	Details
geo bulk	RNA-seq in mouse embryonic stem cells treated with or without Adriamycin GSE201102 Mus musculus	2 samples	archive_table 7.35 MB	Not in ASAP	Details
geo bulk	Genomic and Biological Analysis of the Mechanism Underlying Dibifree Dietary ... GSE245369 Homo sapiens	2 samples	archive_table 7.57 MB	Not in ASAP	Details
geo bulk	Satb2 deletion in colon approach to treat short bowel syndrome GSE279770 Mus musculus	2 samples	archive_table 7.62 MB	Not in ASAP	Details
geo bulk	Genome-wide maps of transcription in GART overexpression(OE) and wildtype(WT)... GSE222866 Homo sapiens	2 samples	counts_table 7.81 MB	Not in ASAP	Details
geo bulk	Transcriptional profile of gamma-delta T cells in C.difficile infection GSE143124 Mus musculus	2 samples	archive_table 7.82 MB	Not in ASAP	Details
geo bulk	Digital Gene Expression data of two Trypanosoma brucei hybrids (T.b.brucei cr... GSE24435 Trypanosoma brucei brucei x Trypanosoma gambiense 181; Trypanosoma brucei brucei x Trypanosoma gambiense 414	2 samples	archive_table 7.88 MB	Not in ASAP	Details
geo bulk	Pseudogenes limit the identification of novel common transcripts generated by... GSE215459 Homo sapiens	2 samples	archive_table 8.24 MB	Not in ASAP	Details
geo bulk	RNA-Seq analyses with sorted ROSLow cells and ROSHigh cells GSE97197 Homo sapiens	2 samples	archive_table 8.27 MB	Not in ASAP	Details
geo bulk	Transcriptional analysis of maize leaf tissue treated with seaweed extract un... GSE188626 Zea mays	2 samples	archive_table 8.35 MB	Not in ASAP	Details
geo bulk	Effect of microgravity on HUVECs (Human Umbilical vein Endothelial cells) cel... GSE80292 Homo sapiens	2 samples	archive_table 8.54 MB	Not in ASAP	Details
geo bulk	Targeting of CAT and VCAM1 as novel therapeutic targets for DMD cardiomyopathy GSE166560 Homo sapiens	2 samples	archive_table 9.11 MB	Not in ASAP	Details
geo bulk	Transcriptome analysis of BT549 cells overexpressing SNHG15 GSE220492 Homo sapiens	2 samples	counts_table 9.16 MB	Not in ASAP	Details
geo bulk	Pervasive promoter-proximal regulation in archaea: RNA-seq of cells during ex... GSE141461 Saccharolobus solfataricus	2 samples	archive_table 9.21 MB	Not in ASAP	Details
geo bulk	Effect of omipalisib on transcriptome and signaling pathways in leukemic cell... GSE224155 Homo sapiens	2 samples	archive_table 9.46 MB	Not in ASAP	Details
geo bulk	ATAC-seq of OT-I cells co-cultured with vehicle or TAMos under OVA257-264 sti... GSE224872 Mus musculus	2 samples	archive_table 9.48 MB	Not in ASAP	Details
geo bulk	Mapping the global chromatin connectivity network in colorectal cancer cell H... GSE138647 Homo sapiens	2 samples	archive_table 9.64 MB	Not in ASAP	Details
geo bulk	Impact of LARP7 depletion on the transcriptome of HEK293 cells GSE126682 Homo sapiens	2 samples	archive_table 9.9 MB	Not in ASAP	Details
geo bulk	High-throughput sequencing of oxidative stress for Human gastric cancer cell ... GSE173219 Homo sapiens	2 samples	counts_table 9.97 MB	Not in ASAP	Details
geo bulk	Dual inhibition of P38 MAPK and JNK pathways preserves stemness markers and a... GSE268475 Homo sapiens	2 samples	archive_table 10 MB	Not in ASAP	Details
geo bulk	RNA-seq for HEK293T: a high-throughput method for R-loop mapping and quantita... GSE219070 Homo sapiens	2 samples	archive_table 10 MB	Not in ASAP	Details