External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Perineurium integrates leptin with its sympathetic outflow to protect against... GSE233163 Mus musculus	12 samples	counts_table 114 MB	Not in ASAP	Details
geo bulk	Atlas of human gut-associated lymphoid tissue reveals immunomodulatory intera... GSE327417 Homo sapiens	12 samples	archive_table 129 MB	Not in ASAP	Details
geo bulk	Non-viral in situ gene editing effectively and safely rescues congenital icht... GSE314473 Homo sapiens	12 samples	archive_table 171 MB	Not in ASAP	Details
geo bulk	DPM1 regulates ER-stress sensor IRE1 activity and antitumor immunity in color... GSE324690 Mus musculus	12 samples	archive_table 173 MB	Not in ASAP	Details
geo bulk	Cross-Species Transcriptomic Integration Reveals a Conserved, MIRO1-Mediated ... GSE324505 Mus musculus; Homo sapiens	12 samples	archive_table 183 MB	Not in ASAP	Details
geo bulk	PRC2 primes bivalent target genes for transcription induction independent of ... GSE255094 Mus musculus	12 samples	archive_table 184 MB	Not in ASAP	Details
geo bulk	Antiviral Tfh response by “tolerant” congenitally infected virus carriers dri... GSE272559 Mus musculus	12 samples	archive_table 188 MB	Not in ASAP	Details
geo bulk	Quantitative profiling of SMG6 cleavage sites in HEK293 cells GSE291379 Homo sapiens	12 samples	archive_table 202 MB	Not in ASAP	Details
geo bulk	Life-saving left ventricular assist devices promote a transcriptomic signatur... GSE301840 Homo sapiens	12 samples	archive_table 228 MB	Not in ASAP	Details
geo bulk	In vitro butyrate modifies epigenetic and immune pathways in peripheral monon... GSE296038 Homo sapiens	12 samples	archive_table 269 MB	Not in ASAP	Details
geo bulk	Medicinal Cannabis Plant Extract (NTI164) modifies epigenetic, ribosomal, and... GSE301611 Homo sapiens	12 samples	archive_table 272 MB	Not in ASAP	Details
geo bulk	Novel Mechanism of Gene Expression Regulation [RNA-Seq] GSE338539 Arabidopsis thaliana	12 samples	archive_table 283 MB	Not in ASAP	Details
geo bulk	A multimodal characterization of the human uncinate fasciculus GSE319830 Homo sapiens	12 samples	counts_table 303 MB	Not in ASAP	Details
geo bulk	Nuclear Speckles enable processing of RNA from GC-rich Isochores [SON_Halo_SR... GSE264307 Homo sapiens	12 samples	archive_table 318 MB	Not in ASAP	Details
geo bulk	CCL3 and IL-7 Synergistically Enhance CAR-T Efficacy in Solid Tumors GSE330826 Mus musculus	12 samples	archive_table 319 MB	Not in ASAP	Details
geo bulk	B Cell-Intrinsic Type I Interferon Signaling Contributes to Defective Vaccine... GSE304898 Mus musculus	12 samples	archive_table 331 MB	Not in ASAP	Details
geo bulk	Focal white matter lesions drive grey matter inflammation, neuronal dysfuncti... GSE311781 Rattus norvegicus	12 samples	archive_table 333 MB	Not in ASAP	Details
geo bulk	IL15 — Driven Crosstalk Between Liver Sinusoidal Endothelial Cells and CD8⁺ T... GSE327253 Mus musculus	12 samples	archive_table 352 MB	Not in ASAP	Details
geo bulk	Mycobacteria infection induced cascade of epigenetic alterations promote trai... GSE278768 Homo sapiens	12 samples	archive_table 352 MB	Not in ASAP	Details
geo bulk	Cell Death Modalities Modulate Inflammatory and Regenerative Programs in Zebr... GSE306020 Danio rerio	12 samples	archive_table 370 MB	Not in ASAP	Details
geo bulk	The Landscape of regulatory element evolution in Panicum hallii GSE316229 Panicum hallii var. filipes; Panicum hallii var. hallii	12 samples	archive_table 439 MB	Not in ASAP	Details
geo bulk	Mineralocorticoid Receptor Antagonism Reduces Atrial Arrhythmias Post- Cardia... GSE315225 Homo sapiens	12 samples	archive_table 443 MB	Not in ASAP	Details
geo bulk	mTORC1 activation induces B7-H3–dependent metabolic reprogramming in renal ce... GSE307301 Mus musculus	12 samples	archive_table 453 MB	Not in ASAP	Details
geo bulk	TFR cells regulate the specificity of anti-commensal IgA in the gut and repre... GSE320270 Mus musculus	12 samples	archive_table 461 MB	Not in ASAP	Details
geo bulk	Chromosome 5q deletion drives evolution to aneuploidy in an iPSC model of com... GSE282370 Homo sapiens	12 samples	archive_table 464 MB	Not in ASAP	Details