External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Cellular and molecular signatures of the vascular microenvironment define the... GSE307433 Mus musculus	12 samples	archive_table 473 MB	Not in ASAP	Details
geo bulk	SFB-Driven Remodeling of Peyer’s Patches Enhances IgA and IgG2b Class Switchi... GSE301577 Mus musculus	12 samples	archive_table 484 MB	Not in ASAP	Details
geo bulk	Butyrate is anti-inflammatory at low and pro-inflammatory at high concentrations GSE272870 Homo sapiens	12 samples	archive_table 491 MB	Not in ASAP	Details
geo bulk	Mesenchymal-epithelial transition serves to rapidly, yet transiently, restore... GSE296238 Mus musculus	12 samples	archive_table 493 MB	Not in ASAP	Details
geo bulk	FABP7 Progenitors are a Targetable Metabolic Root in the BRCA1 Breast GSE249915 Homo sapiens	12 samples	counts_table 524 MB	Not in ASAP	Details
geo bulk	Whole-transcriptome sequencing reveals the inflammatory endotypes and potenti... GSE210515 Homo sapiens	12 samples	archive_table 572 MB	Not in ASAP	Details
geo bulk	Discovery of a therapeutic antibody for p53 high-frequency mutations in pan-c... GSE297617 Mus musculus	12 samples	archive_table 600 MB	Not in ASAP	Details
geo bulk	RelA signaling in Scgb1a1+ epithelial progenitors mediates alveolar atypia in... GSE291797 Mus musculus; Human respiratory syncytial virus A strain Long	12 samples	archive_table 652 MB	Not in ASAP	Details
geo bulk	The evolution of the p53 transcriptional response across primates GSE217051 Papio anubis; Homo sapiens; Aotus nancymaae; Nomascus leucogenys; Macaca mulatta; Pan troglodytes; Pongo pygmaeus; Gallus gallus; Pan paniscus; Gorilla gorilla; Bos taurus; Saimiri boliviensis	12 samples	archive_table 662 MB	Not in ASAP	Details
geo bulk	Macrophage-Induced Senescent Cancer-Associated Fibroblasts Promote SASP-Media... GSE335811 Homo sapiens	12 samples	archive_table 712 MB	Not in ASAP	Details
geo bulk	KIF5A downregulation in spinal muscular atrophy links axonal regeneration def... GSE302774 Homo sapiens	12 samples	archive_table 778 MB	Not in ASAP	Details
geo bulk	α-Synuclein blocks endoplasmic reticulum protein translocation in Parkinson’s... GSE276377 Homo sapiens	12 samples	archive_table 792 MB	Not in ASAP	Details
geo bulk	An In Vivo Model of a-Synuclein Spread from Gut to Brain GSE316223 Danio rerio	12 samples	archive_table 822 MB	Not in ASAP	Details
geo bulk	Molecular architecture of the tumor microenvironment caused by BRCA1 and BRCA... GSE292700 Homo sapiens	12 samples	archive_table 828 MB	Not in ASAP	Details
geo bulk	HFD-induced metabolic syndrome is promoted by JNK7b isoform GSE303383 Mus musculus	12 samples	archive_table 898 MB	Not in ASAP	Details
geo bulk	Developmental origins of fibroblasts determine their scarring potential in wo... GSE248850 Mus musculus	12 samples	archive_table 944 MB	Not in ASAP	Details
geo bulk	Cultured ex vivo human brain tissue maintains cell-type transcriptional ident... GSE328077 Homo sapiens	12 samples	archive_table 985 MB	Not in ASAP	Details
geo bulk	Epithelial-mesenchymal transition is associated with altered immune compositi... GSE303505 Mus musculus	12 samples	archive_table 992 MB	Not in ASAP	Details
geo bulk	Fracture Healing Requires Proliferation of Callus Cells at Early and Mature S... GSE343272 Mus musculus	12 samples	archive_table 1.01 GB	Not in ASAP	Details
geo bulk	Autophagy maintains HEV identity and function during inflammation. GSE300153 Mus musculus	12 samples	archive_table 1.04 GB	Not in ASAP	Details
geo bulk	Mechanotransduction unifies healthy non-diabetic wound healing over time by p... GSE326622 Mus musculus	12 samples	archive_table 1.05 GB	Not in ASAP	Details
geo bulk	Mitochondrially Transcribed dsRNA Mediates Manganese-induced Neuroinflammation GSE316010 Homo sapiens	12 samples	archive_table 1.07 GB	Not in ASAP	Details
geo bulk	α7nAChR activation reduces inflammation and apoptosis, promoting muscle regen... GSE304280 Mus musculus	12 samples	archive_table 1.11 GB	Not in ASAP	Details
geo bulk	Genomic characterization of sub-populations in human pluripotent stem cell-de... GSE297722 Homo sapiens	12 samples	archive_table 1.17 GB	Not in ASAP	Details
geo bulk	Gpc3 Selectively Suppresses Subcutaneous Adipogenesis in Diet-Induced Obesity GSE298345 Mus musculus	12 samples	archive_table 1.29 GB	Not in ASAP	Details