External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Neonatal Roselovirus Infection Induces Predisposition to Systemic Autoimmunity GSE328681 Mus musculus	12 samples	archive_table 1.31 GB	Not in ASAP	Details
geo bulk	Excitatory and inhibitory neurons accumulate distinct Ab plaques in mouse mod... GSE292822 Mus musculus	12 samples	archive_table 1.34 GB	Not in ASAP	Details
geo bulk	Elucidating early intestinal stem cell response to bacterial infection GSE277691 Mus musculus	12 samples	archive_table 1.34 GB	Not in ASAP	Details
geo bulk	Skin-resident Langerhans Cells Drive Neuropathic Pain via Chemokine-Dependent... GSE327170 Mus musculus	12 samples	archive_table 1.37 GB	Not in ASAP	Details
geo bulk	The Transcription Factor IRF8 drives tumor-specific exhaustion in CD8 T cells GSE333230 Mus musculus	12 samples	archive_table 1.52 GB	Not in ASAP	Details
geo bulk	Heterogeneity in hematopoietic stem cell enables adaptation to the aged micro... GSE326529 Mus musculus	12 samples	archive_table 1.53 GB	Not in ASAP	Details
geo bulk	Patient-Derived Lymphoma Spheroids Reveal Predictive Markers of Glofitamab Re... GSE306092 Homo sapiens	12 samples	archive_table 1.53 GB	Not in ASAP	Details
geo bulk	2′-O-methylation-dependent installation of N2-methylguanosine in the U6 inter... GSE303357 Homo sapiens	12 samples	archive_table 1.6 GB	Not in ASAP	Details
geo bulk	Regulation of the type I interferon response by chromatin organization (RNA-s... GSE270817 Mus musculus	12 samples	archive_table 1.61 GB	Not in ASAP	Details
geo bulk	Myosin VB is Critical for Progenitor Cell Function in the intestine GSE300032 Mus musculus	12 samples	archive_table 1.95 GB	Not in ASAP	Details
geo bulk	Ketone body β-hydroxybutyrate restores Tau proteostasis via metabolism-indepe... GSE314609 Mus musculus	12 samples	archive_table 2.56 GB	Not in ASAP	Details
geo bulk	Sustained A2AR expression and loss paradoxically promote CD8+ T cell exhaustion GSE310452 Mus musculus	12 samples	archive_table 2.6 GB	Not in ASAP	Details
geo bulk	TLR9-Mediated Macrophage-ILC Activation Induces Antigen-Independent Antiviral... GSE319693 Mus musculus	12 samples	archive_table 2.63 GB	Not in ASAP	Details
geo bulk	Aldosterone-induced gene expression changes in the brain GSE326616 Mus musculus	12 samples	archive_table 3.23 GB	Not in ASAP	Details
geo bulk	Role of TAp63 in myogenesis GSE213428 Mus musculus	12 samples	archive_table 4.09 GB	Not in ASAP	Details
geo bulk	Dysregulated TGFb-ERK Signaling Drives Aberrant Extracellular Matrix Producti... GSE315927 Homo sapiens	12 samples	archive_table 4.79 GB	Not in ASAP	Details
geo bulk	Paternal methamphetamine exposure enhances methamphetamine susceptibility in ... GSE296372 Rattus norvegicus	12 samples	archive_table 6.16 GB	Not in ASAP	Details
geo bulk	Dual BCL-xL and BCL-2 Inhibition for Advanced Myeloid Neoplasms: A phase 1 do... GSE312447 Homo sapiens	12 samples	archive_table 7.96 GB	Not in ASAP	Details
geo bulk	Maternal obesity remodels nutrient transporttranscriptional programs in early... GSE327799 Mus musculus	12 samples	archive_table 9.38 GB	Not in ASAP	Details
geo bulk	Multiome analysis of tumors isolated from Apc cKO; Kras-mutant animals GSE301967 Mus musculus	12 samples	archive_table 9.83 GB	Not in ASAP	Details
geo bulk	Sensitive CAR T cells redefine targetable CD70 expression in solid tumors [Mu... GSE306275 Homo sapiens	12 samples	archive_table 19.1 GB	Not in ASAP	Details
geo bulk	OxyR regulates the oxidative stress response in Zymomonas mobilis during oxic... GSE332662 Zymomonas mobilis	13 samples	counts_table 55.1 KB	Not in ASAP	Details
geo bulk	Epigenetic gene regulation by type I restriction modification systems in Stre... GSE293985 Streptococcus pneumoniae	13 samples	counts_table 112 KB	Not in ASAP	Details
geo bulk	Multiple Factors Contribute to Guaiacol Production by Alicyclobacillus acidot... GSE313619 Alicyclobacillus suci; Alicyclobacillus acidoterrestris	13 samples	counts_table 118 KB	Not in ASAP	Details
geo bulk	The potent biodegrading actinomycete Rhodococcus opacus 1CP: Relating aromati... GSE294731 Rhodococcus opacus	13 samples	counts_table 310 KB	Not in ASAP	Details