External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Osteopontin links acquired resistance to hypoxia-inducing antiangiogenics wit... GSE241539 Mus musculus	13 samples	archive_table 2.01 MB	Not in ASAP	Details
geo bulk	Transcriptomic characterization of endogenous and transplanted myeloid cells ... GSE255893 Mus musculus	13 samples	archive_table 2.29 MB	Not in ASAP	Details
geo bulk	Generation of functional salivary gland progenitor cells from extended plurip... GSE293153 Homo sapiens	13 samples	counts_table 2.56 MB	Not in ASAP	Details
geo bulk	Human iPSC-Derived Cardiac Progenitor Cells Recapitulate Endogenous CPC Funct... GSE329469 Homo sapiens	13 samples	counts_table 2.58 MB	Not in ASAP	Details
geo bulk	High-protein diet alleviate cardiac damage, adipose tissue inflammation, and ... GSE262679 Mus musculus	13 samples	counts_table 3.42 MB	Not in ASAP	Details
geo bulk	Comparative transcriptomic analysis of in vivo–derived and IVF porcine embryo... GSE316594 Sus scrofa	13 samples	counts_table 3.51 MB	Not in ASAP	Details
geo bulk	Deregulated megakaryocytic maturation, mitochondrial function and inflammator... GSE290319 Homo sapiens	13 samples	archive_table 4.11 MB	Not in ASAP	Details
geo bulk	Establishment of Human Formative Pluripotent Stem Cell Like Cells Exhibiting ... GSE298429 Homo sapiens; Mus musculus	13 samples	counts_table 4.36 MB	Not in ASAP	Details
geo bulk	Targeting PPAR-γ Mitigates Fibrosis and Arrhythmia in DSG2-Linked Arrhythmoge... GSE305362 Mus musculus	13 samples	archive_table 4.58 MB	Not in ASAP	Details
geo bulk	RNA-seq analysis of PAPD5 inhibitor effects in expanded human induced pluripo... GSE314271 Homo sapiens	13 samples	counts_table 5.65 MB	Not in ASAP	Details
geo bulk	Base editing reveals an essential role for NANOG in human embryo lineage spec... GSE319780 Homo sapiens	13 samples	counts_table 9.02 MB	Not in ASAP	Details
geo bulk	Chinmo defines the region-specific oncogenic competence in the Drosophila cen... GSE306602 Drosophila melanogaster	13 samples	archive_table 10.7 MB	Not in ASAP	Details
geo bulk	CD99 Promotes Self-renewal in Hematopoietic Stem Cells and Leukemia Stem Cell... GSE233596 Homo sapiens	13 samples	archive_table 45.2 MB	Not in ASAP	Details
geo bulk	Type I interferon signaling in microglia drives synaptic engulfment and neuro... GSE328709 Mus musculus	13 samples	archive_table 171 MB	Not in ASAP	Details
geo bulk	A transcriptomic atlas of immune cell populations in glaucomatous mouse retin... GSE293358 Mus musculus	13 samples	archive_table 311 MB	Not in ASAP	Details
geo bulk	A transcription regulator atlas identifies TOX3 as an Atoh1 co-activator in c... GSE312658 Mus musculus	13 samples	archive_table 366 MB	Not in ASAP	Details
geo bulk	N-glycans in non-malignant tumor microenvironment cells dampen CAR-T cell fun... GSE270301 Homo sapiens	13 samples	archive_table 475 MB	Not in ASAP	Details
geo bulk	Effect of coixenolide on pancreatic tumor gene expression in HFD and CD groups GSE302413 Mus musculus	13 samples	archive_table 650 MB	Not in ASAP	Details
geo bulk	Charting the transition from in vitro gliogenesis to the in vivo maturation o... GSE283328 Homo sapiens; Mus musculus	13 samples	archive_table 876 MB	Not in ASAP	Details
geo bulk	Beyond CD30 Targeting: Brentuximab Vedotin Triggers Immunogenic Cell Death an... GSE303446 Homo sapiens	13 samples	archive_table 1.07 GB	Not in ASAP	Details
geo bulk	Analysis of murine pancreatitis tissues and KPC PDAC tumours GSE311531 Mus musculus	13 samples	archive_table 1.07 GB	Not in ASAP	Details
geo bulk	Age- and Tissue-dependent Diversity of Human Plasmacytoid Dendritic Cells Unc... GSE273852 Homo sapiens	13 samples	archive_table 1.28 GB	Not in ASAP	Details
geo bulk	A transient neurodevelopmental microglial state governs cortical maturation a... GSE337230 Mus musculus	13 samples	archive_table 1.36 GB	Not in ASAP	Details
geo bulk	Distinct transcriptional and functional modules mediate resistance to targete... GSE319338 Homo sapiens; Mus musculus	13 samples	archive_table 1.7 GB	Not in ASAP	Details
geo bulk	Distinct tumor immune microenvironmental (TIME) landscapes drive divergent im... GSE301073 Mus musculus	13 samples	archive_table 1.89 GB	Not in ASAP	Details