External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Long-term post-ovariectomy mouse model recapitulates hypothalamic transcripto... GSE288245 Mus musculus	33 samples	counts_table 7.75 MB	Not in ASAP	Details
geo bulk	Metabolic Dependencies in Medulloblastoma Reflect Underlying Cellular Origins GSE318970 Homo sapiens	33 samples	counts_table 9.19 MB	Not in ASAP	Details
geo bulk	Rapid boosting increases germinal center responses to sequential vaccines GSE309127 Mus musculus	33 samples	archive_table 14.1 MB	Not in ASAP	Details
geo bulk	cGAS deficient mice display premature aging associated with loss of chromatin... GSE279026 Mus musculus	33 samples	archive_table 31.1 MB	Not in ASAP	Details
geo bulk	Cell Cycle Reprogramming Mediates Acquired Oxaliplatin Resistance in Pancreat... GSE293303 Homo sapiens	33 samples	archive_table 57.6 MB	Not in ASAP	Details
geo bulk	Adjuvant personalized multivalent neoantigen DNA vaccination for MGMT unmethy... GSE292045 Homo sapiens	33 samples	archive_table 89.2 MB	Not in ASAP	Details
geo bulk	Self-clustering of three CBX2 molecules drives PRC2 to promote facultative he... GSE318279 Mus musculus	33 samples	archive_table 189 MB	Not in ASAP	Details
geo bulk	Medullary cavity expansion is mediated by distinct cell populations during fe... GSE228319 Mus musculus	33 samples	archive_table 198 MB	Not in ASAP	Details
geo bulk	Monocyte Subset Predicts Clinical Outcomes in Fibrotic Hypersensitivity Pneum... GSE317902 Homo sapiens	33 samples	archive_table 250 MB	Not in ASAP	Details
geo bulk	Unbiased niche labeling maps immune-excluded niche in bone metastasis GSE263383 Mus musculus	33 samples	archive_table 551 MB	Not in ASAP	Details
geo bulk	Cell-free genomics reveals fundamental regulatory principles of the Mycobacte... GSE270670 Mycobacterium tuberculosis	33 samples	archive_table 627 MB	Not in ASAP	Details
geo bulk	Lariats-derive siRNA by PTGS pathway mediate endogenous gene silencing and tr... GSE284626 Arabidopsis thaliana	33 samples	archive_table 861 MB	Not in ASAP	Details
geo bulk	Deep-learning Analysis of 3D Microarchitectural Remodeling in Hypertrophic Ca... GSE308244 Sus scrofa	33 samples	archive_table 903 MB	Not in ASAP	Details
geo bulk	Enrichment of CD4-CD8- cytotoxic Vδ1/3 T cells in pulmonary tuberculosis disease GSE312606 Homo sapiens	33 samples	archive_table 994 MB	Not in ASAP	Details
geo bulk	Splice isoforms of the histone variants macroH2A1 differentially regulate hip... GSE332710 Mus musculus	33 samples	archive_table 1.59 GB	Not in ASAP	Details
geo bulk	SenCat: Cataloging human cell senescence through multiomic profiling of multi... GSE302792 Mus musculus	33 samples	archive_table 1.6 GB	Not in ASAP	Details
geo bulk	Temporal misexpression of En1 during limb development causes distinct phenoty... GSE277393 Mus musculus	33 samples	archive_table 5.21 GB	Not in ASAP	Details
geo bulk	SOX4 Mediated Differentiation of Specific T Lymphocyte Subsets at the Materna... GSE298146 Homo sapiens	34 samples	counts_table	Not in ASAP	Details
geo bulk	Translational reprogramming of dentate gyrus peptidergic circuitry gates anti... GSE309750 Mus musculus	34 samples	counts_table 317 KB	Not in ASAP	Details
geo bulk	Nucleolar Expansion Drives 3D Genome Reorganization and Transcriptional Repre... GSE315576 Homo sapiens	34 samples	counts_table 637 KB	Not in ASAP	Details
geo bulk	PEG3 function in trophoblast stem cells GSE228265 Mus musculus	34 samples	counts_table 919 KB	Not in ASAP	Details
geo bulk	Novel syngeneic cell lines for studying high-risk BRAFV600E-driven colorectal... GSE296998 Mus musculus	34 samples	counts_table 980 KB	Not in ASAP	Details
geo bulk	Dependence of cell fate potential and cadherin switching on primitive streak ... GSE317192 Homo sapiens	34 samples	counts_table 1.35 MB	Not in ASAP	Details
geo bulk	NR2F6 deletion revives CAR‑T cell function and induces antigen‑agnostic immun... GSE284026 Mus musculus	34 samples	counts_table 1.36 MB	Not in ASAP	Details
geo bulk	Bronchoalveolar lavage-derived immune cells from CVID patients with GLILD dif... GSE322936 Homo sapiens	34 samples	counts_table 1.45 MB	Not in ASAP	Details