External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Cancer associated fibroblasts promote epithelial to mesenchymal transition an... GSE313826 Homo sapiens	37 samples	counts_table 2.05 MB	Not in ASAP	Details
geo bulk	Disease-associated mutations on the STAT5B SH2 domain regulate cholesterol an... GSE310017 Mus musculus	37 samples	archive_table 3.7 MB	Not in ASAP	Details
geo bulk	Can caffeine improve the survival of the ant Formica fusca under pathogenic i... GSE317441 Formica fusca	37 samples	archive_table 4.46 MB	Not in ASAP	Details
geo bulk	Interferon-γ mediated species-specific immune responses in macrophages to Myc... GSE307006 Homo sapiens; Mus musculus	37 samples	counts_table 4.96 MB	Not in ASAP	Details
geo bulk	Discovery of cephalotaxinone enzymes reveals a whole plant model for homoharr... GSE319274 Cephalotaxus harringtonia	37 samples	counts_table 7.29 MB	Not in ASAP	Details
geo bulk	Large adipocytes increase vesicle-mediated lipid release and promote breast c... GSE315592 Mus musculus	37 samples	archive_table 10.4 MB	Not in ASAP	Details
geo bulk	Separate transcription and splicing gene networks are linked and coordinated ... GSE278461 Homo sapiens	37 samples	archive_table 20.7 MB	Not in ASAP	Details
geo bulk	MondoA mediates transcriptional coordination between the MYC network and the ... GSE316429 Homo sapiens	37 samples	archive_table 384 MB	Not in ASAP	Details
geo bulk	Retrospective analysis reveals the early origin and development of pulmonary ... GSE268414 Mus musculus	37 samples	archive_table 600 MB	Not in ASAP	Details
geo bulk	ZNF512B Safeguards Genome Integrity at Regulatory Regions to Repress SASP and... GSE206078 Homo sapiens	37 samples	archive_table 1.14 GB	Not in ASAP	Details
geo bulk	Tumor-specific lncRNA IGF1R-AS1 trans-regulates chromatin interactions associ... GSE208745 Homo sapiens	37 samples	archive_table 3.75 GB	Not in ASAP	Details
geo bulk	Functional dissection of enhancers in 2-Cell embryo with an in vitro model. GSE283389 Mus musculus	37 samples	archive_table 7.28 GB	Not in ASAP	Details
geo bulk	Prefrontal-raphe-habenular circuit drives fear memory recall and updating GSE300145 Mus musculus	38 samples	counts_table 786 KB	Not in ASAP	Details
geo bulk	Transcription initiation drives dosage compensation establishment and mainten... GSE307585 Drosophila melanogaster	38 samples	counts_table 821 KB	Not in ASAP	Details
geo bulk	Spatiotemporal regulation of arbuscular mycorrhizal symbiosis at cellular res... GSE308140 Oryza sativa	38 samples	counts_table 956 KB	Not in ASAP	Details
geo bulk	BRD4 O-GlcNAcylation attenuates phase separation to regulate transcription GSE282031 Homo sapiens	38 samples	counts_table 1.14 MB	Not in ASAP	Details
geo bulk	Decoding Gene Responsiveness to Synthetic Chromatin Reader-Actuators with Mul... GSE333192 Homo sapiens	38 samples	counts_table 1.18 MB	Not in ASAP	Details
geo bulk	CyCLoPs: A approach for detecting immune responses with in vivo labeling of c... GSE309768 Mus musculus	38 samples	counts_table 1.29 MB	Not in ASAP	Details
geo bulk	RNA-seq for the Kyoto clear cell carcinoma cohort. GSE306901 Homo sapiens	38 samples	counts_table 1.44 MB	Not in ASAP	Details
geo bulk	Chemotherapy-induced extracellular matrix remodelling in HGSOC GSE270878 Mus musculus	38 samples	counts_table 1.53 MB	Not in ASAP	Details
geo bulk	Maternal obesity influences transcriptomic and metagenomic profiles in term n... GSE303891 Homo sapiens	38 samples	counts_table 1.71 MB	Not in ASAP	Details
geo bulk	RNA-seq analysis of rat liver under drug treatment GSE317736 Rattus norvegicus	38 samples	counts_table 1.99 MB	Not in ASAP	Details
ebi_sc sc	Functional germ line stem cells do not exist in adult mammalian ovaries Publication DOI E-MTAB-2983 Homo sapiens	38 cells	h5ad 8.7 MB	Not in ASAP	Details
geo bulk	Characterizing the role of fibroadipogenic progenitor in experimental model o... GSE256324 Mus musculus	38 samples	archive_table 39.4 MB	Not in ASAP	Details
geo bulk	Aberrant mRNA Splicing and Impaired Hippocampal Neurogenesis in Grin2b Mutant... GSE306924 Mus musculus	38 samples	archive_table 71.9 MB	Not in ASAP	Details