External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	IL-17RC signaling connects intestinal microbiota and neuroimmune interactions... GSE322757 Mus musculus	42 samples	counts_table 2.53 MB	Not in ASAP	Details
geo bulk	Transcriptome analysis of Vigna radiata leaves in response to direct and pre-... GSE334477 Vigna radiata	42 samples	counts_table 2.63 MB	Not in ASAP	Details
geo bulk	Transcriptional profiling of SARS-CoV-2-infected Calu-3 cells. GSE254699 Homo sapiens	42 samples	counts_table 2.63 MB	Not in ASAP	Details
geo bulk	FOXO/DAF-16 modulates the transcription factor ROR/NHR-23 and inhibits the le... GSE338973 Caenorhabditis elegans	42 samples	counts_table 2.71 MB	Not in ASAP	Details
geo bulk	Systemic comparison of dCas9-based DNA methylation editing systems for speci... GSE297435 Homo sapiens	42 samples	counts_table 3.68 MB	Not in ASAP	Details
geo bulk	Transcrpitomic analysis of Oral lichen planus and oral lichenoid lesions GSE303468 Homo sapiens	42 samples	counts_table 3.75 MB	Not in ASAP	Details
geo bulk	Nonsense mediated decay degrades nonproductive RNAs produced by alternative R... GSE232084 Arabidopsis thaliana	42 samples	counts_table 4.34 MB	Not in ASAP	Details
geo bulk	Transcriptional readthrough and splicing upon chemotherapy treatment GSE283813 Homo sapiens	42 samples	counts_table 5.57 MB	Not in ASAP	Details
geo bulk	Coordinating catalytic and non-canonical functions of EZH2 sensitizes tumors ... GSE323364 Homo sapiens	42 samples	counts_table 6.64 MB	Not in ASAP	Details
geo bulk	Convergence of cytokine dysregulation and antibody deficiency in common varia... GSE330223 Homo sapiens	42 samples	archive_table 7.82 MB	Not in ASAP	Details
geo bulk	The homozygous founder Psmb8 variant of Nakajo-Nishimura syndrome/proteasome-... GSE325357 Mus musculus	42 samples	archive_table 8.69 MB	Not in ASAP	Details
geo bulk	Stem cell-derived human glutamatergic neurons with pathogenic KCNQ2 variants ... GSE291694 Mus musculus	42 samples	archive_table 9.54 MB	Not in ASAP	Details
geo bulk	IRF2 degradation tunes the innate immune response, LPS and IFNb treatment [RN... GSE268647 Mus musculus	42 samples	archive_table 19.9 MB	Not in ASAP	Details
geo bulk	Signal-responsive transcription factors cooperate to establish alveolar macro... GSE243165 Mus musculus	42 samples	archive_table 20.1 MB	Not in ASAP	Details
geo bulk	Hyperactive PI3K-delta in Th1 and Th2 differentiation [RNA-seq] GSE277881 Mus musculus	42 samples	archive_table 28.8 MB	Not in ASAP	Details
geo bulk	RNA seq(normal depth) RNA Polymerase III inhibition leads to changes in prote... GSE337523 Homo sapiens	42 samples	counts_table 31.5 MB	Not in ASAP	Details
geo bulk	Placental TRPV2 supports trophoblast function and normal fetal development GSE334003 Mus musculus	42 samples	archive_table 94.8 MB	Not in ASAP	Details
geo bulk	Identify genes regulated by RUNX2, NCOR1, and HDAC3 in osteosarcoma cells GSE280227 Homo sapiens	42 samples	archive_table 102 MB	Not in ASAP	Details
geo bulk	Loss of Hepatocyte PI3Ka Protects Mice from Hepatocellular Carcinoma in assoc... GSE302836 Mus musculus	42 samples	archive_table 114 MB	Not in ASAP	Details
geo bulk	Integrated RNA, translation, and proteome profiling reveals midbody remnants ... GSE305263 Homo sapiens	42 samples	archive_table 117 MB	Not in ASAP	Details
geo bulk	Integrative CSF profiling identifies disease-specific immune responses in lep... GSE286518 Homo sapiens	42 samples	counts_table 125 MB	Not in ASAP	Details
geo bulk	Oncogenic KRAS promotes pancreatic ductal adenocarcinoma (PDAC) through post-... GSE281227 Mus musculus	42 samples	archive_table 147 MB	Not in ASAP	Details
geo bulk	Robust effector memory features of human T-bet-hi B cells induced by repeate... GSE315668 Homo sapiens	42 samples	archive_table 678 MB	Not in ASAP	Details
geo bulk	DNMT1 loss leads to hypermethylation of a subset of late replicating domains ... GSE297847 Homo sapiens	42 samples	archive_table 1.77 GB	Not in ASAP	Details
geo bulk	Nrf2-mediated chromatin activation of hyperosmotic response genes attenuates ... GSE266024 Mus musculus	42 samples	archive_table 1.88 GB	Not in ASAP	Details