External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Molecular phenotypes in early gallbladder and liver disease in the CFTR-/- sh... GSE306255 Ovis aries	42 samples	archive_table 2.02 GB	Not in ASAP	Details
geo bulk	Tracking mobilization uncovers an evolutionarily conserved mechanism in suppr... GSE272746 Drosophila melanogaster; Mus musculus	42 samples	archive_table 2.43 GB	Not in ASAP	Details
geo bulk	Regulation of lineage reprogramming by dynamic chromatin SUMOylation (RNA-seq) GSE311975 Homo sapiens	42 samples	archive_table 4.76 GB	Not in ASAP	Details
geo bulk	Epigenetic reprogramming drives cellular and phenotypic plasticity in liposar... GSE324208 Homo sapiens	42 samples	archive_table 69.5 GB	Not in ASAP	Details
geo bulk	The Transcriptomic landscape of Kaposi Sarcoma Herpes Virus GSE334036 Homo sapiens	43 samples	counts_table 3.73 KB	Not in ASAP	Details
geo bulk	H2AK119ub1-MLL2 counteraction underlies heritable H3K27me3 formation in oocytes GSE292237 Mus musculus	43 samples	counts_table 291 KB	Not in ASAP	Details
geo bulk	Genetic deletion of RUNX1 or RUNX2 in adipocytes enhanced beige fat formation GSE292084 Mus musculus	43 samples	counts_table 475 KB	Not in ASAP	Details
geo bulk	Consistent lack of efficacy of nintedanib in a spirometry-confirmed and bleom... GSE308578 Mus musculus	43 samples	counts_table 1.39 MB	Not in ASAP	Details
geo bulk	A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine pr... GSE271053 Mus musculus	43 samples	counts_table 1.83 MB	Not in ASAP	Details
geo bulk	HDAC4 myonuclear reprogramming underlies denervation and weakness following m... GSE314430 Homo sapiens	43 samples	counts_table 2.53 MB	Not in ASAP	Details
geo bulk	Sex-Biased Transcription in Early Postnatal Layer 2/3 Cortical Neurons: Inter... GSE310138 Mus musculus	43 samples	counts_table 3.08 MB	Not in ASAP	Details
geo bulk	Reversible epiblast regionalisation determines differentiation potential of h... GSE335881 Homo sapiens	43 samples	counts_table 3.73 MB	Not in ASAP	Details
geo bulk	Identification of IPF Specific Genes Expressed by Lung Tissue - Derived Fibro... GSE301181 Homo sapiens	43 samples	counts_table 3.75 MB	Not in ASAP	Details
geo bulk	Friedreich’s ataxia transcriptomic dysregulation and identification of cell t... GSE319887 Homo sapiens	43 samples	counts_table 3.82 MB	Not in ASAP	Details
geo bulk	Bromodomain Inhibitors to Prevent Development of Resistance to Targeted Kinas... GSE302434 Homo sapiens	43 samples	counts_table 4.52 MB	Not in ASAP	Details
geo bulk	On the way to elucidate the effects of cannabidiol (CBD) on living organisms ... GSE328789 Mus musculus	43 samples	archive_table 7.93 MB	Not in ASAP	Details
geo bulk	Tissue tension fosters macrophage-driven lipid peroxidation-induced DNA damag... GSE299513 Mus musculus	43 samples	archive_table 54.4 MB	Not in ASAP	Details
geo bulk	Elucidating the impact of chemotherapy on skeletal progenitors GSE296761 Mus musculus; Homo sapiens	43 samples	archive_table 132 MB	Not in ASAP	Details
geo bulk	BAF complexes maintain accessibility at stimulus-responsive chromatin and are... GSE318083 Homo sapiens	43 samples	archive_table 132 MB	Not in ASAP	Details
geo bulk	Integrated Clinical Trial and Molecular Profiling Reveals Immune Drivers of C... GSE279422 Homo sapiens	43 samples	archive_table 160 MB	Not in ASAP	Details
geo bulk	Faecalibacterium prausnitzii EXL01 for the Maintenance of Steroid-induced Cli... GSE327577 Homo sapiens	43 samples	archive_table 172 MB	Not in ASAP	Details
geo bulk	Activation of the aryl hydrocarbon receptor in human melanoma cells enhances ... GSE305296 Homo sapiens	43 samples	archive_table 1.36 GB	Not in ASAP	Details
geo bulk	Thalamic NRXN1-Mediated Input to Human Cortical Progenitors Drives Excitatory... GSE325956 Homo sapiens	43 samples	archive_table 1.6 GB	Not in ASAP	Details
geo bulk	Human-specific morphoregulatory signatures in basal radial glia characterise ... GSE331438 Gorilla gorilla gorilla; Pan troglodytes	43 samples	archive_table 7.49 GB	Not in ASAP	Details
geo bulk	A proteomics screen uncovers CTCF as a key G-quadruplex binding protein GSE330560 Mus musculus	43 samples	archive_table 9.21 GB	Not in ASAP	Details