External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Continuous evolution of gene libraries towards arbitrary functions reveals th... GSE335699 Saccharomyces cerevisiae	44 samples	counts_table 361 KB	Not in ASAP	Details
geo bulk	Versatile SMAD2 and SMAD3 epitope-tagged mouse models for genome-wide profili... GSE315433 Mus musculus	44 samples	counts_table 607 KB	Not in ASAP	Details
geo bulk	An anti-adhesive compound modulating the production of Staphylococcus aureus ... GSE290916 Staphylococcus aureus	44 samples	archive_table 670 KB	Not in ASAP	Details
geo bulk	CRISPR/Cas9 screening reveals key role of STK11/LKB1 in vasopressin-mediated ... GSE326336 Mus musculus	44 samples	counts_table 745 KB	Not in ASAP	Details
geo bulk	Truncation of the p300/CBP TAZ2 domain promotes tumor progression GSE319434 Homo sapiens	44 samples	counts_table 758 KB	Not in ASAP	Details
geo bulk	Transcriptomic Profiling of Psoriatic Lesions by Tape-Stripping Reveals Site-... GSE312703 Homo sapiens	44 samples	counts_table 1.23 MB	Not in ASAP	Details
geo bulk	Lipid-Associated Macrophage Polarization Drives Chronic Xenograft Fibrosis vi... GSE311717 Macaca fascicularis; Sus scrofa	44 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	Functional interaction of Epidermal growth factor and Angiotensin II in femal... GSE292207 Homo sapiens	44 samples	counts_table 1.88 MB	Not in ASAP	Details
geo bulk	Anti-inflammatory and phosphorylation effects of CFTR modulator triple therap... GSE289932 Homo sapiens	44 samples	counts_table 2.08 MB	Not in ASAP	Details
geo bulk	Urolithin A attenuates inflammation and enhances barrier integrity in an expe... GSE312490 Homo sapiens	44 samples	counts_table 2.6 MB	Not in ASAP	Details
geo bulk	Targeting the oncohistone-ASCL1 axis disrupts plasticity and suppresses pedia... GSE269557 Homo sapiens	44 samples	counts_table 3.38 MB	Not in ASAP	Details
geo bulk	Acute degron-mediated RUNX1 loss reprograms enhancer activity associated with... GSE314305 Homo sapiens	44 samples	counts_table 3.64 MB	Not in ASAP	Details
geo bulk	Transcriptional activity during seed imbibition is conserved, robust and requ... GSE297284 Arabidopsis thaliana	44 samples	archive_table 4.84 MB	Not in ASAP	Details
geo bulk	Combined BET Bromodomain and DNMT Inhibition Targets Lineage Plasticity in Pr... GSE309034 Homo sapiens	44 samples	archive_table 17.3 MB	Not in ASAP	Details
geo bulk	Whole Transcriptome Characterization of a Small Intestine Epithelial Cell Lin... GSE256406 Homo sapiens	44 samples	archive_table 207 MB	Not in ASAP	Details
geo bulk	Differentiation of tumor-infiltrating GZMK+ effector memory T cells associate... GSE296954 Homo sapiens	44 samples	archive_table 319 MB	Not in ASAP	Details
geo bulk	TET1 non-catalytic activity shapes the chromatin-landscape that directs de no... GSE318256 Mus musculus	44 samples	archive_table 1020 MB	Not in ASAP	Details
geo bulk	B-cell depletion improves therapeutic index of combination checkpoint blockad... GSE335494 Homo sapiens	44 samples	archive_table 1.53 GB	Not in ASAP	Details
geo bulk	cGAS-mediated IFN-I signaling contributes to disease progression in drug-refr... GSE334405 Mus musculus	44 samples	archive_table 4.13 GB	Not in ASAP	Details
geo bulk	Transcriptome-wide mapping reveals an RNA-dependent mechanism of platinum can... GSE310425 Homo sapiens	44 samples	archive_table 4.51 GB	Not in ASAP	Details
geo bulk	A forward genetic screen identifies Sirtuin1 as a driver of neuroendocrine pr... GSE271066 Mus musculus	44 samples	archive_table 6.99 GB	Not in ASAP	Details
geo bulk	Long-term maintenance of H3K27me3 in postmitotic neurons is dispensable for g... GSE329815 Mus musculus	44 samples	archive_table 17 GB	Not in ASAP	Details
geo bulk	Expression Analysis (RNA-Seq) of adult Myelodysplastic Syndromes (MDS)/Acute ... GSE211032 Homo sapiens	45 samples	counts_table 271 KB	Not in ASAP	Details
geo bulk	DNA methylation and transcriptomic profiles of Wilms tumour reveal new deregu... GSE303967 Homo sapiens	45 samples	counts_table 1.22 MB	Not in ASAP	Details
geo bulk	Characterization of a panel of mouse primary cell lines from Myc-driven mamma... GSE294562 Mus musculus	45 samples	counts_table 1.49 MB	Not in ASAP	Details