External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	N6-methyladenosine modulate second cell fate decision by enhancing mRNA stabi... GSE282840 Mus musculus	46 samples	counts_table 512 KB	Not in ASAP	Details
geo bulk	Circulating tRNA-Derived Fragments in Women with Endometriosis: A Pilot Study GSE343024 Homo sapiens	46 samples	counts_table 577 KB	Not in ASAP	Details
geo bulk	Hepatocyte MLKL Drives Obesity-Driven Hepatocellular Carcinoma Progression vi... GSE338648 Homo sapiens; Mus musculus	46 samples	counts_table 1.23 MB	Not in ASAP	Details
geo bulk	Immune and Repair Mechanisms Underlying Congenital Chagas GSE311812 Homo sapiens	46 samples	counts_table 1.34 MB	Not in ASAP	Details
geo bulk	PARP1 Suppression Drives ROS Resistance in Aneuploid Cancer Cells GSE322780 Homo sapiens	46 samples	counts_table 1.44 MB	Not in ASAP	Details
geo bulk	CSF immune cell alterations in women with neuropsychiatric Long COVID GSE297499 Homo sapiens	46 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	GENE EXPRESSION DURING SEA LAMPREY EMBRYOGENESIS GSE337484 Petromyzon marinus	46 samples	counts_table 1.62 MB	Not in ASAP	Details
geo bulk	Activated Interferon Signaling Suppresses Age-Dependent Liver Cancer [RNA-Seq] GSE313650 Mus musculus	46 samples	counts_table 1.95 MB	Not in ASAP	Details
geo bulk	Single nucleotide insertion within a remote enhancer causes XX mice to be bor... GSE291809 Mus musculus	46 samples	counts_table 1.98 MB	Not in ASAP	Details
geo bulk	Silencing mitochondrial gene expression in living cells GSE292101 Homo sapiens	46 samples	counts_table 3.87 MB	Not in ASAP	Details
geo bulk	Neurotranscriptomics of mutualistic cleaning in Ladridae wrasses GSE302322 Thalassoma lunare; Halichoeres melanurus; Coris batuensis; Hemigymnus melapterus; Labrichthys unilineatus	46 samples	archive_table 6.68 MB	Not in ASAP	Details
ebi_sc sc	Single-cell RNA-seq analysis reveals ploidy-dependent and cell-specific trans... Publication DOI E-ENAD-50 Arabidopsis thaliana	46 cells	h5ad 11 MB	Not in ASAP	Details
geo bulk	Does three copies of App contribute to amplified basal interferon signaling i... GSE255679 Mus musculus	46 samples	archive_table 15.5 MB	Not in ASAP	Details
geo bulk	A SINGLE NUCLEOTIDE DELETION DISRUPTS THE TRANSCRIPTIONAL RESPONSE OF THE HAI... GSE311836 Mus musculus	46 samples	archive_table 18.2 MB	Not in ASAP	Details
geo bulk	Integrated small and long RNA sequencing in single oocytes reveals piRNA-medi... GSE296363 Homo sapiens	46 samples	archive_table 67.7 MB	Not in ASAP	Details
geo bulk	A conserved epithelial wound-like transcriptional program driven by FOSL1 und... GSE248585 Mus musculus	46 samples	archive_table 118 MB	Not in ASAP	Details
geo bulk	The RNA Binding Protein ZFP36L2 Displays Tissue-Selective mRNA Targeting in M... GSE283043 Mus musculus	46 samples	archive_table 188 MB	Not in ASAP	Details
geo bulk	Early life B cell memory is archived in the mouse B-1 cell compartment and dr... GSE314341 Mus musculus	46 samples	archive_table 399 MB	Not in ASAP	Details
geo bulk	Positive feedback between cDC1s and CD8+ T cells typifies the inflammation of... GSE213095 Homo sapiens	46 samples	archive_table 1.25 GB	Not in ASAP	Details
geo bulk	A comparative multiomic atlas of human immunity to multiple COVID-19 vaccines GSE318946 Homo sapiens	46 samples	archive_table 1.67 GB	Not in ASAP	Details
geo bulk	A cell-intrinsic glucocorticoid biosynthesis and sensing circuit maintains ... GSE296502 Mus musculus	46 samples	archive_table 1.93 GB	Not in ASAP	Details
geo bulk	NSD2 Degradation Remediates the Oncogenic Cistrome in t(4;14) Multiple Myeloma GSE328217 Homo sapiens	46 samples	archive_table 2.46 GB	Not in ASAP	Details
geo bulk	T cell receptor signaling induces expression of lysine demethylase KDM6B to m... GSE291449 Mus musculus	46 samples	archive_table 2.59 GB	Not in ASAP	Details
geo bulk	de novo H3.2K9me2 deposition pathway establishes heterochromatin for suppress... GSE297750 Drosophila melanogaster	46 samples	archive_table 2.98 GB	Not in ASAP	Details
geo bulk	CBP-IDRs regulate acetylation and gene expression GSE299618 Homo sapiens	46 samples	archive_table 3.36 GB	Not in ASAP	Details