External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Mucus plugs-associated gene expression identifies pathophysiology shared with... GSE302096 Homo sapiens	48 samples	counts_table 7.87 MB	Not in ASAP	Details
geo bulk	MECP2 Mutations Rewire Human ESC Fate and Bias Cortical Lineage Commitment [R... GSE303838 Homo sapiens	48 samples	counts_table 9.01 MB	Not in ASAP	Details
geo bulk	DISTINCTIVE MOLECULAR SIGNATURE AND STRUCTURAL ALTERATIONS OF THE COLONIC BRU... GSE282696 Homo sapiens	48 samples	archive_table 9.61 MB	Not in ASAP	Details
geo bulk	Hepatocyte angiotensinogen deletion protects against Western diet-induced adi... GSE338380 Mus musculus	48 samples	archive_table 10.8 MB	Not in ASAP	Details
geo bulk	Progesterone receptors drive advanced breast cancer phenotypes including cir... GSE310672 Homo sapiens	48 samples	archive_table 11 MB	Not in ASAP	Details
geo bulk	Reprogramming of Cellular Plasticity via ETS and MYC Core-regulatory circuits... GSE280266 Homo sapiens	48 samples	archive_table 11.3 MB	Not in ASAP	Details
geo bulk	Golcadomide with CD20 T-cell engager extends survival in lymphoma model by bo... GSE305825 Homo sapiens	48 samples	archive_table 12.4 MB	Not in ASAP	Details
geo bulk	Post-transcriptional regulation of proliferation and quiescence (mRNAdecay) GSE164893 Homo sapiens	48 samples	archive_table 18 MB	Not in ASAP	Details
geo bulk	Whole Transcriptome Profiling of Lesional Psoriatic and Adjacent Normal Skin ... GSE244679 Homo sapiens	48 samples	archive_table 28.4 MB	Not in ASAP	Details
geo bulk	In vivo double knockout CAR-T screen identifies synergistic gene pairs that e... GSE272885 Homo sapiens	48 samples	counts_table 38.4 MB	Not in ASAP	Details
geo bulk	AMPK promotes TFEB transcriptional activity through dephosphorylation at both... GSE270826 Mus musculus	48 samples	archive_table 87.3 MB	Not in ASAP	Details
geo bulk	Glucocorticoid transcriptome in macrophages upon activation [RNA-seq] GSE306502 Mus musculus	48 samples	archive_table 149 MB	Not in ASAP	Details
geo bulk	siNRAS and siDGKH knockdown in NRAS mutant melanoma cells GSE312301 Homo sapiens	48 samples	archive_table 248 MB	Not in ASAP	Details
geo bulk	Temperature and developmental stage govern intestinal susceptibility to human... GSE320363 Homo sapiens	48 samples	archive_table 321 MB	Not in ASAP	Details
geo bulk	Retinal waves are required for state-dependent visual processing GSE211406 Mus musculus	48 samples	archive_table 395 MB	Not in ASAP	Details
geo bulk	Effete and Cullin 4 affect nuclear organization of the gypsy chromatin insulator GSE243453 Drosophila melanogaster	48 samples	archive_table 538 MB	Not in ASAP	Details
geo bulk	Immunometabolic Endotypes Define Distinct Clinical Trajectories in Type 2 Dia... GSE309967 Homo sapiens	48 samples	archive_table 584 MB	Not in ASAP	Details
geo bulk	X-Linked Cancer-Associated Polypeptide, Encoded by a Putative Noncoding RNA, ... GSE288868 Homo sapiens	48 samples	archive_table 2.2 GB	Not in ASAP	Details
geo bulk	Mutant KRAS-Driven Selective mRNA Translation Reveals Mechanisms and Therapeu... GSE285857 Homo sapiens	48 samples	archive_table 18.3 GB	Not in ASAP	Details
geo bulk	Joint analysis of multiply perturbed cells improves statistical power and cos... GSE337988 Homo sapiens	48 samples	archive_table 24.7 GB	Not in ASAP	Details
geo bulk	Multiomic analysis of equine aging-related osteoarthritis highlights gut micr... GSE313902 Equus caballus	49 samples	counts_table 1.46 MB	Not in ASAP	Details
geo bulk	Infants who develop BPD have an airway endotype defined by vimentin expressio... GSE318575 Homo sapiens	49 samples	counts_table 1.6 MB	Not in ASAP	Details
geo bulk	The Age-Dependent Resident Myonuclear Multi-Omic Response to an Acute Skeleta... GSE319289 Mus musculus	49 samples	counts_table 1.72 MB	Not in ASAP	Details
geo bulk	Transcriptomic Insights into the effect of Mesenchymal Stromal Cells Culture ... GSE294580 Homo sapiens	49 samples	counts_table 3.92 MB	Not in ASAP	Details
geo bulk	An RNA ligase shapes transcriptional profiles, neural function, and behaviour... GSE308510 Danio rerio	49 samples	counts_table 4.49 MB	Not in ASAP	Details