External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Competition for H2A.Z Between IAP Elements and Gene Promoters is Governed by ... GSE237806 Mus musculus	53 samples	counts_table 1.72 MB	Not in ASAP	Details
geo bulk	U2AF1 mutations rescue deleterious exon skipping induced by KRAS mutations [R... GSE328821 Homo sapiens	53 samples	counts_table 2.18 MB	Not in ASAP	Details
geo bulk	L-DOPA treatment promotes sustained neurovascular and synaptic homeostasis in... GSE318897 Mus musculus	53 samples	counts_table 2.56 MB	Not in ASAP	Details
geo bulk	Canonical and isomiR products of miR-142 enhance dendritic cell reprogramming... GSE324642 Homo sapiens	53 samples	counts_table 2.58 MB	Not in ASAP	Details
geo bulk	Preclinical activity of brincidofovir in Peripheral T-cell and NK/T-cell Lymp... GSE295563 Homo sapiens	53 samples	counts_table 3.54 MB	Not in ASAP	Details
geo bulk	p53 safeguards chemical reprogramming of human somatic cells towards pluripot... GSE287612 Homo sapiens	53 samples	counts_table 4.4 MB	Not in ASAP	Details
geo bulk	Novel Cellular Patterns and Gene Drivers of Relapse in Adult Acute Myelogenou... GSE172313 Homo sapiens	53 samples	archive_table 104 MB	Not in ASAP	Details
geo bulk	R-loop maintains the deposition of H3K36me3 to prevent invasion of H3K4me3 du... GSE285321 Mus musculus	53 samples	archive_table 2.72 GB	Not in ASAP	Details
geo bulk	Mechanisms linking cytoplasmic decay of translation-defective mRNA to transcr... GSE256101 Mus musculus; Homo sapiens	53 samples	archive_table 13.4 GB	Not in ASAP	Details
geo bulk	Insights into intestinal neuroendocrine tumors in relation to normal human EE... GSE277215 Homo sapiens	53 samples	archive_table 14 GB	Not in ASAP	Details
geo bulk	RNA sequencing data of leptomeningeal/perivascular CAMs and MG following LPS ... GSE295334 Mus musculus	54 samples	counts_table 515 KB	Not in ASAP	Details
geo bulk	Alu repeat-containing RNA organizes actively transcribed genomic regions arou... GSE281381 Homo sapiens	54 samples	counts_table 653 KB	Not in ASAP	Details
geo bulk	Directed evolution improves the catalytic efficiency of APEX2-mediated proxim... GSE262170 Homo sapiens	54 samples	counts_table 855 KB	Not in ASAP	Details
geo bulk	Bulk RNA-seq of PBMCs collected before and 4 weeks after secukinumab treatmen... GSE328820 Homo sapiens	54 samples	counts_table 1.38 MB	Not in ASAP	Details
geo bulk	Human iPSC cardiomyocyte patch transplantation modifies extracellular matrix ... GSE318811 Rattus norvegicus	54 samples	counts_table 1.42 MB	Not in ASAP	Details
geo bulk	3D porous microscaffold promoted hPSC-macrophage large-scale production by fa... GSE272205 Homo sapiens	54 samples	counts_table 1.62 MB	Not in ASAP	Details
geo bulk	Metabolite-driven remodeling of hepatic lipid metabolism by the plasticizer d... GSE313258 Mus musculus	54 samples	counts_table 2.46 MB	Not in ASAP	Details
geo bulk	Cytomegalovirus as a risk factor for exacerbation of Mycobacterium tuberculos... GSE315842 Mus musculus	54 samples	counts_table 2.55 MB	Not in ASAP	Details
geo bulk	β-Lapachone Antagonizes Ubiquitin-Specific Protease 18 Activity to Elicit Ant... GSE318135 Homo sapiens	54 samples	counts_table 2.57 MB	Not in ASAP	Details
geo bulk	Targeting branched-chain amino acids alleviates pulmonary fibrosis [RNA-seq] GSE295426 Mus musculus	54 samples	counts_table 2.58 MB	Not in ASAP	Details
geo bulk	The effects of ATP and CD39 inhibition in monocyte-derived dendritic cells. GSE287531 Homo sapiens	54 samples	counts_table 2.77 MB	Not in ASAP	Details
geo bulk	miR-375 Regulates Intestinal Crypt Cell Landscape, Proliferation, and Regener... GSE151088 Mus musculus	54 samples	counts_table 3.42 MB	Not in ASAP	Details
geo bulk	Exploratory investigation of changes in blood transcriptome following mepoliz... GSE334345 Homo sapiens	54 samples	counts_table 3.68 MB	Not in ASAP	Details
geo bulk	Transcriptomics of S3 segment in mice: response to type 1 diabetes, SGLT1/2 i... GSE325466 Mus musculus	54 samples	counts_table 4.93 MB	Not in ASAP	Details
geo bulk	High throughput sequencing study GSE313598 Homo sapiens	54 samples	archive_table 5.49 MB	Not in ASAP	Details