External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Neuronal microexons modulate arousal via the cAMP-PKA-CREB pathway in zebrafish GSE295724 Danio rerio	59 samples	counts_table 3.27 MB	Not in ASAP	Details
geo bulk	Transcriptional Analyses of Acinar- And Ductal-Cell-Derived Pancreatic Cancer GSE271004 Mus musculus	59 samples	counts_table 4.24 MB	Not in ASAP	Details
geo bulk	Transcriptome-Proteome analysis of human naive and memory B cell subsets reve... GSE298777 Homo sapiens	59 samples	counts_table 7.35 MB	Not in ASAP	Details
geo bulk	Suppressive Genetic Interactions Between Haploinsufficient Mitochondrial Gene... GSE315447 Mus musculus	59 samples	counts_table 8.75 MB	Not in ASAP	Details
geo bulk	Competition between commensal protists shapes gut mucosal immunity in mice GSE320380 Mus musculus	59 samples	archive_table 59 MB	Not in ASAP	Details
geo bulk	T-cell Multiomic Analysis Identifies Subsets and Mechanisms of Interaction wi... GSE326573 Homo sapiens	59 samples	archive_table 312 MB	Not in ASAP	Details
geo bulk	Heterogenous microglial reactivity contrasts with stable vascular transcripti... GSE300113 Mus musculus	59 samples	archive_table 2.23 GB	Not in ASAP	Details
geo bulk	Transcriptional and epigenetic programs of in vitro-expanded HSPCs and their ... GSE286217 Mus musculus	59 samples	archive_table 4.69 GB	Not in ASAP	Details
geo bulk	Microglial sTREM2 limits dyskinesia and acts on TrkB to support circuit plast... GSE324025 Mus musculus	59 samples	archive_table 5.11 GB	Not in ASAP	Details
geo bulk	Leukemia risk factor ARID5B Coordinates HDAC-Mediated Transcriptional Repression GSE297401 Homo sapiens	59 samples	archive_table 13.2 GB	Not in ASAP	Details
geo bulk	The msf Gene Causes Environment-Specific Transcriptional Shifts Associated wi... GSE330915 Haemophilus influenzae	60 samples	counts_table 254 KB	Not in ASAP	Details
geo bulk	Regulation of mRNA polyadenylation governs body plan formation in gastruloids GSE302657 Mus musculus	60 samples	counts_table 411 KB	Not in ASAP	Details
geo bulk	Physiologic recovery of Mycobacterium tuberculosis from drug injury: A molecu... GSE319987 Mycobacterium tuberculosis str. Erdman = ATCC 35801	60 samples	archive_table 1.16 MB	Not in ASAP	Details
geo bulk	HER2 heterogeneous breast cancer models reveal novel therapeutic targets and ... GSE300628 Homo sapiens	60 samples	counts_table 1.35 MB	Not in ASAP	Details
geo bulk	Effect of red meat metabolites and nutrient deprivation on gene expression of... GSE271991 Homo sapiens	60 samples	counts_table 1.48 MB	Not in ASAP	Details
geo bulk	Bulk RNA-sequencing of the dorsal and ventral hippocampus across age and pari... GSE329776 Rattus norvegicus	60 samples	counts_table 1.77 MB	Not in ASAP	Details
geo bulk	GPR34 regulation of disease-associated microglial states in iMGL GSE327711 Homo sapiens	60 samples	counts_table 1.88 MB	Not in ASAP	Details
geo bulk	IFNγ-independent control of Mycobacterium tuberculosis infection in rhesus ma... GSE303154 Macaca mulatta	60 samples	counts_table 2.22 MB	Not in ASAP	Details
geo bulk	Marquette and Brianna Grapevine Bud Chilling Fulfillment GSE337039 Vitis hybrid cultivar	60 samples	counts_table 2.22 MB	Not in ASAP	Details
geo bulk	TNFR1 expression on cancer cell is critical for immunoescape, shaping an immu... GSE309307 Mus musculus	60 samples	counts_table 2.39 MB	Not in ASAP	Details
geo bulk	Rapid evolution of mouse saliva through regulatory rewiring and gene expansions GSE328310 Mus musculus	60 samples	counts_table 2.77 MB	Not in ASAP	Details
geo bulk	Overcoming Menin inhibitor resistance in AML cells with combinations includin... GSE315341 Homo sapiens	60 samples	counts_table 2.81 MB	Not in ASAP	Details
geo bulk	Cellular Senescence in the Absence of Galactic Cosmic-Ray Muons GSE310137 Homo sapiens	60 samples	counts_table 2.82 MB	Not in ASAP	Details
geo bulk	Gene expression profile of antisense oligonucleotide-treated Neural Progenito... GSE315664 Homo sapiens	60 samples	counts_table 3.32 MB	Not in ASAP	Details
geo bulk	Bulk liver RNA-sequencing of mice co-exposed to simvastatin and 2,3,7,8-tetra... GSE272970 Mus musculus	60 samples	counts_table 4.69 MB	Not in ASAP	Details