External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Lsp2 links mTORC1 to TOP mRNA translation and lifespan in Drosophila GSE297586 Drosophila melanogaster	72 samples	counts_table 517 KB	Not in ASAP	Details
geo bulk	Interplay between cohesin and TORC1 links chromosome segregation and gene exp... GSE316645 Schizosaccharomyces pombe	72 samples	counts_table 917 KB	Not in ASAP	Details
geo bulk	Molecular Indicators of Isometric Exercises Efficacy in Early Rehabilitation ... GSE315228 Homo sapiens	72 samples	counts_table 1.47 MB	Not in ASAP	Details
geo bulk	Silica nanoparticles enhance resistance of Vitis vinifera to downy mildew GSE312954 Vitis vinifera	72 samples	counts_table 1.54 MB	Not in ASAP	Details
geo bulk	P7 hippocampal bulk RNA-seq after neonatal D-betaHB replacement and early mat... GSE343668 Mus musculus	72 samples	counts_table 1.73 MB	Not in ASAP	Details
geo bulk	Brain Transcriptomics Across Diverse Sleep-Wake Manipulations Reveals Multipl... GSE322542 Drosophila melanogaster	72 samples	counts_table 1.91 MB	Not in ASAP	Details
geo bulk	Distinct networks of expressed genes are associated with neophobia in the hip... GSE314481 Passer montanus	72 samples	counts_table 2.53 MB	Not in ASAP	Details
geo bulk	Multi-Omic Analyses of Dietary Fatty Acid-Microbe-Host Interactions Reveal Me... GSE344174 Mus musculus	72 samples	counts_table 2.58 MB	Not in ASAP	Details
geo bulk	Transcriptomic comparison of RA vs healthy monocytes undergoing different ex ... GSE328878 Homo sapiens	72 samples	counts_table 2.65 MB	Not in ASAP	Details
geo bulk	Differential downstream signaling in microglia lacking Alzheimer’s-related TR... GSE316055 Mus musculus	72 samples	counts_table 2.73 MB	Not in ASAP	Details
geo bulk	Plasmodesmal closure triggers stress responses GSE248301 Arabidopsis thaliana	72 samples	counts_table 2.8 MB	Not in ASAP	Details
geo bulk	High-fat diet rewires gut host-microbiota relationship to derive worse outcom... GSE313697 Mus musculus	72 samples	counts_table 2.84 MB	Not in ASAP	Details
geo bulk	Lipotoxic fingerprints in clinically relevant postoperative pancreatic fistula GSE319229 Homo sapiens	72 samples	counts_table 3.19 MB	Not in ASAP	Details
geo bulk	A high-throughput transcriptomic profiling of fibroblasts treated with 0.0005... GSE306317 Homo sapiens	72 samples	counts_table 4.66 MB	Not in ASAP	Details
geo bulk	Transcriptomic Profiling of the Liver during Citrobacter rodentium Infection GSE326680 Mus musculus	72 samples	counts_table 5.01 MB	Not in ASAP	Details
geo bulk	Multiomic analysis reveals that polyamines alter G. vaginalis-induced cervico... GSE311352 Homo sapiens	72 samples	counts_table 5.27 MB	Not in ASAP	Details
geo bulk	Human CD14+ monocytes from early inflammatory arthritis patients before and a... GSE279719 Homo sapiens	72 samples	archive_table 5.76 MB	Not in ASAP	Details
geo bulk	C57BL6 Substrain Differences in Hippocampal-Dependent Learning and Transcriptome GSE291439 Mus musculus	72 samples	counts_table 6.88 MB	Not in ASAP	Details
geo bulk	Genes responding to O3 are regulated during leaf development in hybrid poplar... GSE312938 Populus tremula x Populus alba	72 samples	counts_table 11.2 MB	Not in ASAP	Details
geo bulk	Tumors Hijack Immune-Privileging Regulons via Distinct Cell Types to Confer T... GSE312235 Homo sapiens	72 samples	counts_table 14.2 MB	Not in ASAP	Details
geo bulk	IRE1 drives a homeostatic response to reduced protein influx into the endopla... GSE323963 Homo sapiens	72 samples	counts_table 16.5 MB	Not in ASAP	Details
ebi_sc sc	Single cell RNA-seq of circulating breast cancer cells from 19 women with ER+... Publication DOI E-GEOD-75367 Homo sapiens	72 cells	h5ad 20 MB	Not in ASAP	Details
geo bulk	Maternal IntS11 primes embryonic totipotency by organizing early zygotic tran... GSE299645 Drosophila melanogaster	72 samples	archive_table 24.7 MB	Not in ASAP	Details
geo bulk	Identifying the impact of H3K4 methylation on the circadian clock in aging Dr... GSE262534 Drosophila melanogaster	72 samples	archive_table 69.1 MB	Not in ASAP	Details
geo bulk	A PLURIPOTENT STEM CELL PLATFORM FOR IN VITRO SYSTEMS GENETICS STUDIES OF MOU... GSE335605 Mus musculus	72 samples	archive_table 116 MB	Not in ASAP	Details