External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	P21+TREM2+-Senescent Macrophages Fuel Inflammaging and Metabolic Dysfunction-... GSE319035 Mus musculus	77 samples	counts_table 8.37 MB	Not in ASAP	Details
geo bulk	Dissecting the Role of Myf6 in Facilitating Fibroblast Conversion into Myogen... GSE291101 Mus musculus	77 samples	archive_table 108 MB	Not in ASAP	Details
geo bulk	Transcriptomics analysis of host immune response to P. falciparum malaria [Ye... GSE180757 Homo sapiens	77 samples	archive_table 118 MB	Not in ASAP	Details
geo bulk	Treatment of cholangiocarcinoma using humanized monoclonal antibodies targeti... GSE262166 Homo sapiens	77 samples	archive_table 1.45 GB	Not in ASAP	Details
geo bulk	Transcriptomic profiling of mouse aging soleus muscles and drug interventions GSE338580 Mus musculus	78 samples	counts_table 5.01 MB	Not in ASAP	Details
geo bulk	Whole-genome combinatorial gene fusions generate novel genes for advanced mic... GSE325936 Saccharomyces cerevisiae	78 samples	archive_table 6.84 MB	Not in ASAP	Details
geo bulk	Genomics Analysis of met1-derived epiRILs GSE255301 Arabidopsis thaliana	78 samples	archive_table 9.61 MB	Not in ASAP	Details
geo bulk	Cerebral vascular transcriptome profiling reveals intermittent fasting modula... GSE246617 Mus musculus	78 samples	counts_table 11.4 MB	Not in ASAP	Details
geo bulk	Species-Specific Roles of SP1 in Bovine and Human Embryonic Genome Activation... GSE304792 Bos taurus; Homo sapiens	78 samples	archive_table 1.23 GB	Not in ASAP	Details
geo bulk	Senescent activated naive B cells promote anti-citrullinated antigen T cell r... GSE342939 Homo sapiens	78 samples	archive_table 1.79 GB	Not in ASAP	Details
geo bulk	High-Resolution Lineage Tracing in Native Tissue Contexts GSE327939 Mus musculus	79 samples	archive_table 730 KB	Not in ASAP	Details
geo bulk	Miniaturisation of duckweeds occurred through compression of the angiosperm b... GSE325314 Pistia stratiotes; Colocasia esculenta; Lemna minor; Spirodela polyrhiza	79 samples	counts_table 968 KB	Not in ASAP	Details
geo bulk	A transcriptomic atlas of the parasitoid wasp Nasonia vitripennis across ploi... GSE337528 Nasonia vitripennis	79 samples	counts_table 1.96 MB	Not in ASAP	Details
geo bulk	Placental gene signatures associated with high neonatal adiposity: role for i... GSE318865 Homo sapiens	79 samples	counts_table 5.01 MB	Not in ASAP	Details
geo bulk	Social hierarchy shapes behavioral and transcriptional responses to chronic s... GSE325386 Mus musculus	79 samples	counts_table 6.96 MB	Not in ASAP	Details
geo bulk	miRNA-seq and RNA-seq profiles of breast cancer cell lines GSE237728 Homo sapiens	79 samples	archive_table 212 MB	Not in ASAP	Details
geo bulk	An EZH2—SREBP2 axis promotes cholesterol biosynthesis and represents a noncan... GSE287355 Homo sapiens; Mus musculus	79 samples	archive_table 3.2 GB	Not in ASAP	Details
geo bulk	Argonautes and small RNAs associated with nematode programmed DNA elimination GSE316157 Ascaris suum	79 samples	archive_table 5.84 GB	Not in ASAP	Details
geo bulk	Ecological role structures community function more than species identity in s... GSE343375 synthetic metagenome	80 samples	counts_table 2.2 KB	Not in ASAP	Details
geo bulk	Optimized Protocol for Culturing Porcine Retinal Explants and RNA Isolation GSE318246 Sus scrofa	80 samples	counts_table 2.34 MB	Not in ASAP	Details
geo bulk	Gene expression changes of C.elegans during aging and in daf-16(mu86) mutants GSE329137 Caenorhabditis elegans	80 samples	counts_table 2.74 MB	Not in ASAP	Details
geo bulk	Grapevines pre-treated with biocontrol bacteria have an altered transcription... GSE303794 Vitis vinifera	80 samples	counts_table 2.82 MB	Not in ASAP	Details
geo bulk	Transcriptomic changes underlying progression from islet autoantibody positiv... GSE178493 Homo sapiens	80 samples	counts_table 3.48 MB	Not in ASAP	Details
geo bulk	Early multi-omic signatures and machine learning models predict cardiomyocyte... GSE314132 Homo sapiens	80 samples	counts_table 7.92 MB	Not in ASAP	Details
geo bulk	A high-resolution, sex-stratified atlas of transcriptional and alternative sp... GSE328655 Mus musculus	80 samples	counts_table 11.1 MB	Not in ASAP	Details