External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Muco-Obstructive Lung Disease Exhibits Distinct Hypoxic and Inflammatory Airw... GSE314018 Homo sapiens	88 samples	counts_table 2.99 MB	Not in ASAP	Details
geo bulk	M-cadherin regulates the formation of adherens junctions and secondary myofib... GSE315987 Mus musculus	88 samples	counts_table 3.06 MB	Not in ASAP	Details
geo bulk	Transcriptomic Analysis of SLE Disease Activity in Resting Naive (rN) and Tra... GSE262846 Homo sapiens	88 samples	counts_table 5.25 MB	Not in ASAP	Details
geo bulk	Localized PD-1 CAR T therapy reprograms neuroinflammation - human CSF data. GSE308973 Homo sapiens	88 samples	archive_table 47.5 MB	Not in ASAP	Details
geo bulk	The CRAC channel inhibitor Auxora interrupts inflammatory circuits between al... GSE330843 Homo sapiens	88 samples	archive_table 314 MB	Not in ASAP	Details
geo bulk	Functional redundancy between UTY and UTX in regulating the localization of t... GSE301298 Homo sapiens	88 samples	archive_table 1.03 GB	Not in ASAP	Details
geo bulk	CFP1-mediated H3K4me3 broad domains control early B cell lineage fate determi... GSE289627 Mus musculus	88 samples	archive_table 7.81 GB	Not in ASAP	Details
geo bulk	Haldane’s rule in the developing brain: X-linked and imprinted genes contribu... GSE311072 Mus musculus domesticus; Mus spretus; Mus musculus domesticus x Mus spretus	89 samples	counts_table 13.1 MB	Not in ASAP	Details
geo bulk	Bulk RNA-seq profiling of pleural mesothelioma and comparator pleural specimens GSE327166 Homo sapiens	89 samples	counts_table 22.3 MB	Not in ASAP	Details
geo bulk	Chromatin accessibility and transcriptomic changes underlying progression fro... GSE178494 Homo sapiens	89 samples	archive_table 38.2 MB	Not in ASAP	Details
geo bulk	IL-15 Signaling During a Critical NK Cell Developmental Window Subverts Matur... GSE318454 Homo sapiens	89 samples	archive_table 1.08 GB	Not in ASAP	Details
geo bulk	Targeting EBF2 condensates modulates adipose thermogenesis GSE297178 Mus musculus	90 samples	counts_table 605 KB	Not in ASAP	Details
geo bulk	Hepatic cellular stress response pathways exhibit species differences in basa... GSE330151 Rattus norvegicus; Macaca fascicularis; Mus musculus; Homo sapiens; Canis lupus familiaris	90 samples	counts_table 679 KB	Not in ASAP	Details
geo bulk	Early transcriptional divergence underlies cell fate bias in bovine embryos GSE301333 Bos taurus	90 samples	counts_table 1.51 MB	Not in ASAP	Details
geo bulk	A transcriptomic map of ligand-receptor interactions within bovine antral fol... GSE330668 Bos taurus	90 samples	counts_table 2.65 MB	Not in ASAP	Details
geo bulk	Adaption to chronic hypercapnia drives time- and site-dependent changes in br... GSE299625 Capra hircus	90 samples	counts_table 2.68 MB	Not in ASAP	Details
geo bulk	Piezo1-dependent activation of stromal cells ignites muscle inflammation in e... GSE297515 Mus musculus	90 samples	counts_table 2.96 MB	Not in ASAP	Details
geo bulk	Microglia transcriptome systematic scoring to evaluate the efficacy of human ... GSE298271 Rattus norvegicus	90 samples	counts_table 3.77 MB	Not in ASAP	Details
geo bulk	Investigating microenvironment in CMML GSE248596 Homo sapiens	90 samples	counts_table 3.82 MB	Not in ASAP	Details
geo bulk	Spatial transcriptomic profiling identifies lacrimal gland epithelial cell-dr... GSE312237 Mus musculus	90 samples	archive_table 4.56 MB	Not in ASAP	Details
geo bulk	let-7 and lin-46 are the essential targets of the LIN28 RNA-binding protein i... GSE315952 Caenorhabditis elegans	90 samples	counts_table 11 MB	Not in ASAP	Details
geo bulk	Gene expression profiling of human DLD-1 cells after instant depletion of TRE... GSE291063 Homo sapiens	90 samples	counts_table 11.3 MB	Not in ASAP	Details
geo bulk	Transcriptomic atlas of the durum wheat plant development GSE318160 Triticum turgidum subsp. durum	90 samples	counts_table 12.3 MB	Not in ASAP	Details
geo bulk	Transcriptomic signatures of Trichomonas vaginalis isolates that exhibit low,... GSE326939 Trichomonas vaginalis	90 samples	archive_table 65.8 MB	Not in ASAP	Details
geo bulk	A patient derived xenograft repository capturing clinical and molecular heter... GSE314566 Homo sapiens	90 samples	archive_table 2.13 GB	Not in ASAP	Details