External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Downregulated transcription in chromosomal domains of midbrain dopamine neuro... GSE311978 Homo sapiens	97 samples	counts_table 52.9 MB	Not in ASAP	Details
geo bulk	Large-scale tethered screen of RNA-binding proteins reveals novel regulators ... GSE290248 Homo sapiens	97 samples	archive_table 986 MB	Not in ASAP	Details
geo bulk	N6-methyladenosine modulate second cell fate decision by enhancing mRNA stabi... GSE283382 Mus musculus	98 samples	counts_table 520 KB	Not in ASAP	Details
geo bulk	In vitro modeling of nutritional and mitochondrial-targeted therapies for ost... GSE259286 Homo sapiens	98 samples	archive_table 129 MB	Not in ASAP	Details
geo bulk	Clinical cure of chronic hepatitis B is associated with priming and perpetuat... GSE291286 Homo sapiens	98 samples	archive_table 1.04 GB	Not in ASAP	Details
geo bulk	METTL3-mediated m6A modification controls Tcra recombination center formation... GSE333480 Mus musculus	98 samples	archive_table 3.4 GB	Not in ASAP	Details
geo bulk	Dissecting the Role of Myf6 in Facilitating Fibroblast Conversion into Myogen... GSE291103 Mus musculus	98 samples	archive_table 5.28 GB	Not in ASAP	Details
geo bulk	Polycomb Chromatin Topology Enables Long-Range Enhancer Recruitment during Cr... GSE296815 Mus musculus	98 samples	archive_table 8.05 GB	Not in ASAP	Details
geo bulk	Hypoxic regulation of chromatin and gene transcription GSE296192 Homo sapiens	98 samples	archive_table 26.6 GB	Not in ASAP	Details
geo bulk	Bulk RNA-seq of multiple organs in LmnaG609G progeria mice with inducible Δ13... GSE315211 Mus musculus	99 samples	counts_table 3.88 MB	Not in ASAP	Details
geo bulk	Pooled CRISPR screens identify genes and non-coding genomic regions that regu... GSE308629 Homo sapiens	99 samples	archive_table 14.7 MB	Not in ASAP	Details
geo bulk	Mitochondrial double-stranded RNA triggers chronic stress in aged neurons GSE301408 Homo sapiens	100 samples	counts_table 710 KB	Not in ASAP	Details
geo bulk	Vitamin B2 Sensing by the Nuclear Receptor AhR Reprograms Hepatic Metabolism ... GSE341321 Homo sapiens; Mus musculus	100 samples	counts_table 1.59 MB	Not in ASAP	Details
geo bulk	Preconception exposures of female mice to a panel of metabolic disruptors ind... GSE324852 Mus musculus	100 samples	counts_table 4.06 MB	Not in ASAP	Details
geo bulk	Molecular and Structural Basis of Pan-Resistance to BTK Inhibitors and Degraders GSE330399 Homo sapiens	100 samples	counts_table 4.58 MB	Not in ASAP	Details
geo bulk	Mechanisms by which whole genome doubling drives breast tumor evolution GSE273087 Mus musculus	100 samples	archive_table 23 GB	Not in ASAP	Details
geo bulk	Receptor Tyrosine Kinases phosphorylate RNA polymerase II at signal-responsiv... GSE202763 Homo sapiens	100 samples	archive_table 53.1 GB	Not in ASAP	Details
geo bulk	Splicing fidelity infuences the fate of mRNA molecules GSE302375 synthetic construct; Homo sapiens	101 samples	archive_table 240 MB	Not in ASAP	Details
geo bulk	Lariats-derived siRNA by PTGS pathway mediate endogenous gene silencing and t... GSE298301 Arabidopsis thaliana	101 samples	archive_table 1.67 GB	Not in ASAP	Details
geo bulk	Deconvolution of regulatory T cell heterogeneity identifies cycling precursor... GSE253572 Homo sapiens; Rattus norvegicus	101 samples	archive_table 1.82 GB	Not in ASAP	Details
geo bulk	Molecular characterisation of the metastatic cell state in Breast Cancer GSE281492 Homo sapiens; Mus musculus	101 samples	archive_table 7.73 GB	Not in ASAP	Details
geo bulk	A functional antagonism between let-7 and miR-17 family members relying on se... GSE303559 Homo sapiens	102 samples	counts_table 442 KB	Not in ASAP	Details
geo bulk	Sex differences in cardiac recovery and corresponding gene expression in a ra... GSE317340 Rattus norvegicus	102 samples	counts_table 2.91 MB	Not in ASAP	Details
geo bulk	Targeting Modulated Vascular Smooth Muscle Cells in Atherosclerosis via FAP-D... GSE314854 Mus musculus; Homo sapiens	102 samples	archive_table 29.9 GB	Not in ASAP	Details
geo bulk	Cohesin-mediated chromatin organization controls the differentiation and func... GSE271298 Mus musculus	103 samples	archive_table 11.2 GB	Not in ASAP	Details