External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Computational modeling and preclinical evaluation support targeting somatic i... GSE338964 Homo sapiens	104 samples	archive_table 3.21 MB	Not in ASAP	Details
geo bulk	Whole transcriptome analysis reveals T cell signaling activation in septic pa... GSE273700 Homo sapiens	104 samples	counts_table 3.31 MB	Not in ASAP	Details
geo bulk	Gene expression profiling of neoadjuvant ABFOLFOX treatment in patients with ... GSE330465 Homo sapiens	104 samples	counts_table 3.85 MB	Not in ASAP	Details
geo bulk	Tuning siRNA Specificity through Seed Region Incorporation of Deoxyribonucleo... GSE313756 Homo sapiens; Mus musculus	104 samples	archive_table 214 MB	Not in ASAP	Details
geo bulk	CDK8 Inhibition Releases the Muscle Differentiation Blockade in Fusion-driven... GSE303028 Homo sapiens	104 samples	archive_table 11.3 GB	Not in ASAP	Details
geo bulk	A Patient-Derived Xenograft Model Identifies AK1 as a Key Regulator of Metast... GSE334033 Homo sapiens	105 samples	counts_table 942 KB	Not in ASAP	Details
geo bulk	Lifelong restriction of dietary valine has sex-specific benefits for health a... GSE298741 Mus musculus	105 samples	archive_table 2.35 MB	Not in ASAP	Details
geo bulk	Minimally invasive 1 mm skin biopsies capture regional transcriptomic heterog... GSE311770 Homo sapiens	105 samples	counts_table 3.12 MB	Not in ASAP	Details
geo bulk	Extracellular vesicles and their RNA cargo facilitate bidirectional cross-kin... GSE297395 Homo sapiens	105 samples	counts_table 3.65 MB	Not in ASAP	Details
geo bulk	A tumor-associated photoreceptor signature unifies distinct central nervous s... GSE275307 Mus musculus	105 samples	archive_table 302 MB	Not in ASAP	Details
geo bulk	Maternal immune activation delays DNA methylation and physiological maturatio... GSE293592 Mus musculus	106 samples	counts_table 5.35 MB	Not in ASAP	Details
geo bulk	Dynamicity of Topoisomerase 1 binding at super-enhancers regulates TLR-respon... GSE333477 Mus musculus; Homo sapiens	106 samples	archive_table 2.65 GB	Not in ASAP	Details
geo bulk	Astrocyte glucocorticoid receptor signaling restricts neuronal plasticity GSE306265 Mus musculus	106 samples	archive_table 7.14 GB	Not in ASAP	Details
geo bulk	Transcriptomic reprogramming driven by nuclear and cell size perturbations vi... GSE339383 Saccharomyces cerevisiae; Homo sapiens	107 samples	counts_table 1.21 MB	Not in ASAP	Details
geo bulk	Antiretroviral therapy during development impairs cardiac reverse remodeling ... GSE325635 Rattus norvegicus	107 samples	counts_table 3.22 MB	Not in ASAP	Details
geo bulk	Human myeloid ontogeny drives differentiation potential in the brain environm... GSE307264 Homo sapiens	107 samples	archive_table 47.7 GB	Not in ASAP	Details
geo bulk	Cardiac Radiotherapy-Induced Epigenetic Memory Underlies Electrophysiologic a... GSE291280 Homo sapiens; Mus musculus	108 samples	counts_table 664 KB	Not in ASAP	Details
geo bulk	Multi-tissue microphysiological system captures integrated responses to nutri... GSE330098 Homo sapiens	108 samples	counts_table 3.2 MB	Not in ASAP	Details
geo bulk	Non-Temperature-Induced Antitumor Effects of Amplitude-Modulated Radiofrequen... GSE329984 Homo sapiens	108 samples	counts_table 4.96 MB	Not in ASAP	Details
geo bulk	Quantum Molecular Resonance attenuates an oxidative stress-induced chimeric t... GSE328981 Homo sapiens	108 samples	counts_table 10.2 MB	Not in ASAP	Details
geo bulk	RAS pathway activation and microenvironmental adaptation as hallmarks of myel... GSE279256 Homo sapiens	108 samples	archive_table 23.8 MB	Not in ASAP	Details
geo bulk	BET inhibition synergizes with Golcadomide by suppressing MYC and E2F pathway... GSE305378 Homo sapiens	108 samples	archive_table 27.6 MB	Not in ASAP	Details
geo bulk	Temporal changes in metabolism guide oligodendrocyte precursor cell dynamics ... GSE330029 Homo sapiens	108 samples	counts_table 30.6 MB	Not in ASAP	Details
geo bulk	Immune-microbiome coordination defines interferon setpoints in healthy humans... GSE314922 Homo sapiens	108 samples	archive_table 78 MB	Not in ASAP	Details
geo bulk	IRE1 drives a homeostatic response to reduced protein influx into the endopla... GSE323967 Homo sapiens	108 samples	archive_table 329 MB	Not in ASAP	Details