External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

Source	Dataset	Matrix	Format	ASAP	Actions
geo bulk	Occupancy-based Mechanism Is the Chief Mode of ROS1 Function in Preventing DN... GSE282076 Arabidopsis thaliana; Brassica napus	151 samples	archive_table 2.9 GB	Not in ASAP	Details
geo bulk	Spatially resolved maternal and fetal cell contributions to severe Preeclampsia GSE319236 Homo sapiens	152 samples	archive_table 47.3 GB	Not in ASAP	Details
geo bulk	Neuron type-specific mRNA translation programs provide a gateway for memory c... GSE300675 Mus musculus	153 samples	counts_table 714 KB	Not in ASAP	Details
geo bulk	CBFA2T3-GLIS2 fusion-mediated mSWI/SNF chromatin remodeler disruption generat... GSE328578 Homo sapiens	156 samples	archive_table 457 MB	Not in ASAP	Details
geo bulk	H3K27me3 spreading organizes canonical PRC1 chromatin architecture to regulat... GSE205249 Homo sapiens; Mus musculus	156 samples	archive_table 36.9 GB	Not in ASAP	Details
geo bulk	Identification of an aberrant RNA associated with the initiation of transgene... GSE280623 Lactuca sativa; Arabidopsis thaliana	158 samples	archive_table 630 KB	Not in ASAP	Details
geo bulk	Expression profiling by high throughput sequencing of breast cancer GSE323973 Homo sapiens	158 samples	counts_table 4.76 MB	Not in ASAP	Details
geo bulk	Maternal IntS11 primes embryonic totipotency by organizing early zygotic tran... GSE299646 Drosophila melanogaster	158 samples	archive_table 4.47 GB	Not in ASAP	Details
geo bulk	Insulin resistance is associated with mammary mitochondrial dysfunction at th... GSE342640 Homo sapiens; Mus musculus	159 samples	counts_table 525 KB	Not in ASAP	Details
geo bulk	An unimolecular GIPR:GLP-1R:PPAR , , quintuple agonist eliminates o... GSE314029 Mus musculus	159 samples	counts_table 5.73 MB	Not in ASAP	Details
geo bulk	Comparative circadian transcriptome analysis reveals dampened and phase-advan... GSE326530 Homo sapiens	160 samples	counts_table 2 MB	Not in ASAP	Details
geo bulk	N6-methyladenosine modulate second cell fate decision by enhancing mRNA stabi... GSE282841 Mus musculus	160 samples	archive_table 5.68 MB	Not in ASAP	Details
geo bulk	Histone H4 lysine 20 tri-methylation safeguards breast cancer lineage fidelit... GSE289193 Mus musculus; Homo sapiens	160 samples	archive_table 30.1 GB	Not in ASAP	Details
geo bulk	An infectious murine model for hepacivirus-associated fibrosis and hepatocell... GSE265927 Mus musculus	161 samples	archive_table 235 MB	Not in ASAP	Details
geo bulk	In Vivo Massively Parallel Reporter Assay Reveals Sequence Determinants of mR... GSE330741 Escherichia coli; Homo sapiens; Mus musculus	163 samples	counts_table 9.09 KB	Not in ASAP	Details
ebi_sc sc	Single cell RNA-seq before and after salt treatment in Saccharomyces cerevisiae Publication DOI E-GEOD-102475 Saccharomyces cerevisiae	163 cells	h5ad 9.4 MB	Not in ASAP	Details
geo bulk	Sequence-specific RNA recognition drives Restrictor-mediated termination of e... GSE300453 synthetic construct; Homo sapiens	163 samples	archive_table 24.7 GB	Not in ASAP	Details
geo bulk	Transcriptomic response of largemouth bass (Micropterus nigricans) gill and s... GSE333434 Micropterus salmoides	164 samples	counts_table 2.73 MB	Not in ASAP	Details
ebi_sc sc	Single-cell RNA-seq of murine medullary thymic epithelial cells (mTECs) E-MTAB-5727 Mus musculus	164 cells	h5ad 32 MB	Not in ASAP	Details
geo bulk	WBT-DC Pipeline: Whole Blood Transcriptomics data-based Disease Classification GSE282218 Homo sapiens	165 samples	counts_table 10 MB	Not in ASAP	Details
geo bulk	The differentiation of myeloid progenitors is effected by cascading waves of ... GSE326003 Mus musculus	165 samples	counts_table 20.6 MB	Not in ASAP	Details
geo bulk	BACH1 acts as a pioneer repressor to enable macrophage plasticity and adaptat... GSE245651 Mus musculus	165 samples	archive_table 16.3 GB	Not in ASAP	Details
geo bulk	The placentalia specific histone H3.4 promotes germ cell development and repr... GSE291274 Mus musculus	167 samples	archive_table 3.11 GB	Not in ASAP	Details
geo bulk	Clinical and Molecular differences of hypertensive disorders during pregnancy GSE303463 Homo sapiens	168 samples	counts_table 5 MB	Not in ASAP	Details
geo bulk	Systemic and breast chronic inflammation and hormone disposition promote a tu... GSE276755 Homo sapiens	168 samples	counts_table 21.7 MB	Not in ASAP	Details