Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
e3b8c485-7811-407e-99ed-c7d574be9d7c
Mus musculus
|
3'384 cells x 21'025 genes |
h5ad
103 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP19
|
3'386 cells x 46'601 genes |
counts_table
464 MB
|
Not in ASAP | Details |
|
hca
sc
|
dc1a41f6-9e09-42a6-959e-3be23db6da56::9601aedb-6de9-4a32-8bd9-ed8b78b256e1
Mus musculus
|
3'402 cells |
mtx
83.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a6626b73-a0de-4dee-99aa-2559ab05af11
Mus musculus
|
3'406 cells x 21'025 genes |
h5ad
88.7 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP422
|
3'421 cells x 64'677 genes |
counts_table
65.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
dbf0bd35-87f8-4b25-bc90-a3c54f379907
Homo sapiens
|
3'434 cells x 32'393 genes |
h5ad
27.5 MB
|
Not in ASAP | Details |
|
hca
sc
|
1538d572-bcb7-426b-8d2c-84f3a7f87bb0::daedd0b0-713b-4a6a-bbb8-bdda00dfa9b5
Homo sapiens
|
3'446 cells |
h5
7.42 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
27d3952f-fbbc-497d-98d1-f37f3d555235
Homo sapiens
|
3'457 cells x 15'261 genes |
h5ad
271 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
390f5b6c-1669-452f-920c-eb77d1c1baea
Mus musculus
|
3'460 cells x 27'368 genes |
h5ad
16.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
939d235c-50bd-41e1-83f5-d056d1aeae47
Homo sapiens
|
3'460 cells x 35'477 genes |
h5ad
15.8 MB
|
Not in ASAP | Details |
|
hca
sc
|
7b393e4d-65bc-4c03-b402-aae769299329::969d2b66-634a-4b99-a919-5626f81af20d
Homo sapiens
|
3'460 cells |
h5
10.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ed37b8b1-dacc-42dc-a3e7-f44d6660005b
Mus musculus
|
3'476 cells x 29'286 genes |
h5ad
17.8 MB
|
Not in ASAP | Details |
|
hca
sc
|
7b393e4d-65bc-4c03-b402-aae769299329::a6206090-1f22-413e-8df8-762cdfb9f0b1
Homo sapiens
|
3'498 cells |
h5
9.58 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
5bc26721-894b-4e9a-9423-6ecfd233ab20
Mus musculus
|
3'509 cells x 51'714 genes |
h5ad
56.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0c86f0de-ddcb-454c-b00b-37feb69e7da1
Homo sapiens
|
3'524 cells x 28'468 genes |
h5ad
20.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
19c78a83-561e-4a3f-bc9a-dab8ca018520
Callithrix jacchus
|
3'526 cells x 10'981 genes |
h5ad
44.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b526c3ed-a2f3-4dd8-afb4-77ddcca8aa6a
Danio rerio
|
3'536 cells x 32'031 genes |
h5ad
8.39 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2798
Mus musculus
|
3'541 cells x 32'285 genes |
rds
91.4 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-5
Arabidopsis thaliana
|
3'552 cells |
h5ad
105 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
97232c2e-9e82-4126-8142-310a998fb6b5
Mus musculus
|
3'553 cells x 27'368 genes |
h5ad
18.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-130148
Homo sapiens
|
3'566 cells |
h5ad
67 MB
|
Not in ASAP | Details |
|
hca
sc
|
aecfd908-674c-4d4e-b36e-0c1ceab02245::386c49bc-bd97-4f5f-a096-870b61179791
Homo sapiens
|
3'568 cells |
h5
14 MB
|
Not in ASAP | Details |
|
hca
sc
|
aecfd908-674c-4d4e-b36e-0c1ceab02245::1f6f2280-1c81-46f9-aaad-7352ab264de4
Homo sapiens
|
3'568 cells |
h5ad
59.1 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-84465
Homo sapiens
|
3'588 cells |
h5ad
352 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
774c18c5-efa1-4dc5-9e5e-2c824bab2e34
Homo sapiens
|
3'589 cells x 22'124 genes |
h5ad
31.4 MB
|
Not in ASAP | Details |