External catalog

Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.

Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.

2 – 11'441'407
Reset 16849 candidates
Source Dataset Matrix Format ASAP Actions
cellxgene
sc
Visium spatial - face_scalp_A Publication DOI
9acc2ac1-6acf-4ad3-a8c1-8bffff235e16
Homo sapiens
4'992 cells x 35'477 genes h5ad
162 MB
 Not in ASAP Details
cellxgene
sc
FZ_P18 (ACH006)-Spatial multi-omic map of human myocardial infarction Publication DOI
1017c6ce-80a5-492e-a82e-54b34a3c9f0b
Homo sapiens
4'992 cells x 35'477 genes h5ad
162 MB
 Not in ASAP Details
cellxgene
sc
WSSS_F_IMMsp10864184 Publication DOI
83de2c2c-c102-4b18-9e7d-da36e8ad76ca
Homo sapiens
4'992 cells x 35'477 genes h5ad
163 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499505 Publication DOI
27cd5ac9-80ba-43f3-bb60-740593dabdd0
Homo sapiens
4'992 cells x 35'477 genes h5ad
163 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - bcc_face_ear_A Publication DOI
18d0fe01-3682-4b5d-aa39-2ca937424c83
Homo sapiens
4'992 cells x 35'477 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499409 Publication DOI
60ac2657-f325-46c7-817b-55bdab803105
Homo sapiens
4'992 cells x 35'477 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_THYst9142089 Publication DOI
a614ec2c-5c14-425e-afb9-6c897aba159f
Homo sapiens
4'992 cells x 35'477 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499411 Publication DOI
05f813a4-fc9e-4143-bba9-de93bdd8eece
Homo sapiens
4'992 cells x 35'477 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_THYst9518030 Publication DOI
4cceac62-9513-42a4-90e5-2878dbb0192c
Homo sapiens
4'992 cells x 35'477 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
GT_IZ_P13 (ACH0010)-Spatial multi-omic map of human myocardial infarction Publication DOI
8fb329fb-2801-494b-b1c9-8c01ca0e91bc
Homo sapiens
4'992 cells x 35'477 genes h5ad
164 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499508 Publication DOI
104cfa2a-8f7e-4dcc-a0a3-8fd46711c904
Homo sapiens
4'992 cells x 35'477 genes h5ad
165 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499504 Publication DOI
f25a532c-faf6-4d65-9dac-47d6369508f6
Homo sapiens
4'992 cells x 35'477 genes h5ad
166 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_temple_B_a Publication DOI
1d3c1bab-7b56-4373-9def-200da734a755
Homo sapiens
4'992 cells x 35'477 genes h5ad
166 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample WSSS_THYst9142088 Publication DOI
dbc2f08c-17f6-42c5-9a35-095e606c3958
Homo sapiens
4'992 cells x 35'477 genes h5ad
167 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_nose_A_a Publication DOI
1b11283c-1b3a-4fa6-bf87-bc12c550a019
Homo sapiens
4'992 cells x 35'477 genes h5ad
169 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - bcc_face_nose_A Publication DOI
4e6e0a5d-28f7-4792-a43b-7c3aa50d0265
Homo sapiens
4'992 cells x 35'477 genes h5ad
171 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499503 Publication DOI
30437616-4939-40e0-83da-4cae8186d452
Homo sapiens
4'992 cells x 35'477 genes h5ad
172 MB
 Not in ASAP Details
cellxgene
sc
FZ_GT_P19 (ACH008)-Spatial multi-omic map of human myocardial infarction Publication DOI
f7cd2a61-2bdc-41c0-a845-32f66a62c2b6
Homo sapiens
4'992 cells x 35'477 genes h5ad
174 MB
 Not in ASAP Details
cellxgene
sc
control_P7 (ACH003)-Spatial multi-omic map of human myocardial infarction Publication DOI
4fd2ee79-ab3a-4827-a773-1b7dcd099307
Homo sapiens
4'992 cells x 35'477 genes h5ad
174 MB
 Not in ASAP Details
cellxgene
sc
thymus visium sample TA11556492 Publication DOI
43848156-ba94-47b5-8409-7535cea75678
Homo sapiens
4'992 cells x 35'477 genes h5ad
177 MB
 Not in ASAP Details
cellxgene
sc
WSSS_F_IMMsp10864181 Publication DOI
4ee03124-5782-4187-968a-c178f8b212e1
Homo sapiens
4'992 cells x 35'477 genes h5ad
178 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_glabella_A Publication DOI
da22c90e-3db0-449a-b926-94410031b1d1
Homo sapiens
4'992 cells x 35'477 genes h5ad
178 MB
 Not in ASAP Details
cellxgene
sc
6800STDY12499502 Publication DOI
53d62b10-bae5-48ac-b16e-71be9ba6de59
Homo sapiens
4'992 cells x 35'477 genes h5ad
179 MB
 Not in ASAP Details
cellxgene
sc
Visium spatial - face_cheek_B Publication DOI
4754ff7d-dd0a-4eff-b50c-ee9c7d4bd613
Homo sapiens
4'992 cells x 35'477 genes h5ad
179 MB
 Not in ASAP Details
cellxgene
sc
RZ_P9 (ACH0023)-Spatial multi-omic map of human myocardial infarction Publication DOI
9eb5e239-740e-408b-a494-bfcf2fe8d05b
Homo sapiens
4'992 cells x 35'477 genes h5ad
179 MB
 Not in ASAP Details
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