Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
cellxgene
sc
|
a41c2ddc-e1b8-44bd-948a-ecdf8b80c94d
Mus musculus
|
5'733 cells x 27'368 genes |
h5ad
44.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
9b188f26-c8e1-4a78-af15-622a35a371fc
Homo sapiens
|
5'754 cells x 32'383 genes |
h5ad
33.7 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP307
|
5'758 cells x 13'189 genes |
counts_table
6.61 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2331
Homo sapiens
|
5'759 cells x 15'623 genes |
rds
204 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
e2094676-d4d5-400c-afa5-7ca3ec09025c
Homo sapiens
|
5'762 cells x 15'431 genes |
h5ad
84.2 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2797
Mus musculus
|
5'770 cells x 32'285 genes |
rds
145 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2169
Homo sapiens
|
5'778 cells x 26'099 genes |
counts_table
102 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f10b80d2-836c-48b4-8839-96aabb8262c1
Mus musculus
|
5'779 cells x 27'368 genes |
h5ad
20.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
57d05820-bca5-4471-9a25-4271abfda4f3
Mus musculus
|
5'779 cells x 29'286 genes |
h5ad
24.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
670a9f65-363c-4bb1-a942-bf6d1edea179
Homo sapiens
|
5'785 cells x 14'293 genes |
h5ad
64.7 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::834de191-2a8a-4d45-b077-8a98a32088c8
Homo sapiens
|
5'793 cells |
h5
14.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
57b9310d-8c78-42ca-ad0f-697074789109
Mus musculus
|
5'819 cells x 29'286 genes |
h5ad
27.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
adf0db98-05e8-4834-8ae5-a93e91f56fce
Homo sapiens
|
5'822 cells x 32'383 genes |
h5ad
58.7 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP1333
Mus musculus
|
5'828 cells x 18'923 genes |
counts_table
406 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8848
Mus musculus
|
5'830 cells |
h5ad
185 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
59d14a35-0c86-4eee-90b7-fe59595f522c
Homo sapiens
|
5'833 cells x 12'630 genes |
h5ad
31.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
492d9f77-c4c8-485d-92d7-7686fe6c8482
Homo sapiens
|
5'834 cells x 32'393 genes |
h5ad
81 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2148
Rattus norvegicus
|
5'856 cells x 31'110 genes |
h5ad
30.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
45a4966b-3b49-45d3-9299-c7c3df76737e
Mus musculus
|
5'862 cells x 30'198 genes |
h5ad
122 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-8839
Xenopus tropicalis
|
5'877 cells |
h5ad
71 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6dafb698-7a53-4699-ad13-1b5e2c164be7
Homo sapiens
|
5'882 cells x 58'232 genes |
h5ad
45.3 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-HCAD-13
Homo sapiens
|
5'906 cells |
h5ad
224 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
31b985c0-db79-49db-aad0-376f38e5386d
Callithrix jacchus
|
5'907 cells x 11'817 genes |
h5ad
89.5 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7194
Drosophila melanogaster
|
5'930 cells |
h5ad
73 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7427
Mus musculus
|
5'936 cells |
h5ad
342 MB
|
Not in ASAP | Details |