Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::ed2fc094-cac1-4fd5-9f27-da72d9fbe538
Homo sapiens
|
5'940 cells |
h5
12.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4b8b5fbd-a24e-4d34-864d-16dfd4650d20
Microcebus murinus
|
5'944 cells x 16'400 genes |
h5ad
52.5 MB
|
Details | |
|
cellxgene
sc
|
b94e3bdf-a385-49cc-b312-7a63cc28b77a
Homo sapiens
|
5'970 cells x 31'997 genes |
h5ad
14.9 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0bd1ce9e-c423-4721-8ccf-91d9858342c2
Mus musculus
|
5'973 cells x 27'368 genes |
h5ad
30.7 MB
|
Not in ASAP | Details |
|
hca
sc
|
b91c623b-1945-4727-b167-0a93027b0d3f::dca3c355-b1af-43fb-8a24-9fa2b9881da4
Homo sapiens
|
5'975 cells |
h5
15.7 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
248cf7bf-508b-4c28-a2fd-cabe2ab956aa
Homo sapiens
|
5'980 cells x 16'656 genes |
h5ad
62 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f801b7a9-80a6-4d09-9161-71474deb58ae
Homo sapiens
|
6'044 cells x 32'088 genes |
h5ad
55.5 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2019
Homo sapiens
|
6'049 cells x 33'694 genes |
h5ad
71.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
6347cc90-f284-41d8-a131-db4a37bd796f
Mus musculus
|
6'051 cells x 18'897 genes |
h5ad
89.8 MB
|
Not in ASAP | Details |
|
hca
sc
|
dc1a41f6-9e09-42a6-959e-3be23db6da56::0dd9b6f6-c235-4200-84e1-292dfb14a293
Homo sapiens
|
6'083 cells |
mtx
186 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
f8c77961-67a7-4161-b8c2-61c3f917b54f
Homo sapiens
|
6'101 cells x 56'710 genes |
h5ad
68.2 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-7195
Drosophila melanogaster
|
6'125 cells |
h5ad
74 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
0de831e0-a525-4ec5-b717-df56f2de2bf0
Homo sapiens
|
6'133 cells x 18'736 genes |
h5ad
553 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b2005457-dede-4434-a9c3-dbe41fcd542e
Homo sapiens
|
6'142 cells x 20'402 genes |
h5ad
9.47 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d05737da-341c-47bc-8480-9e79f485063b
Mus musculus
|
6'154 cells x 29'286 genes |
h5ad
17.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1304e107-0f06-4d33-b634-d95ed986d02b
Mus musculus
|
6'171 cells x 35'211 genes |
h5ad
177 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
26865839-1d2b-41b2-9a97-0d301b7d3d72
Mus musculus
|
6'177 cells x 27'368 genes |
h5ad
48.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
91b2327d-e3f3-4f63-b446-20774d20fc33
Homo sapiens
|
6'190 cells x 58'226 genes |
h5ad
53.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
4b204ec8-b526-4056-be20-ecb00c5cd4ec
Mus musculus
|
6'198 cells x 29'286 genes |
h5ad
22 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ef47280b-3e68-4188-a49a-7b8374c8a6f2
Mus musculus
|
6'201 cells x 17'943 genes |
h5ad
65.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
aa6f371d-dacd-47e7-a774-e2f4495604a2
Homo sapiens
|
6'210 cells x 16'609 genes |
h5ad
20.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
a7b46d3a-c85e-4ec2-b5c0-04fa3e50d28b
Microcebus murinus
|
6'235 cells x 16'400 genes |
h5ad
44.1 MB
|
Details | |
|
broad_scp
sc
|
SCP301
|
6'237 cells x 21'049 genes |
counts_table
82.5 MB
|
Not in ASAP | Details |
|
hca
sc
|
08fb10df-32e5-456c-9882-e33fcd49077a::41635e5f-57d6-440b-a6d6-ed9fab645271
Homo sapiens
|
6'249 cells |
h5
20.4 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
54782590-f8b1-4f75-9d26-ea14c023b965
Mus musculus
|
6'265 cells x 29'286 genes |
h5ad
12.7 MB
|
Not in ASAP | Details |