Candidate datasets from CELLxGENE, Bgee, EBI single cell expression atlas, HCA, Broad Single Cell Portal, and GEO. Create an ASAP project from an entry that is not imported yet.
Broad SCP candidates are limited to public, non-embargoed studies under the SCP Terms of Service; redistributed data is for research use only.
| Source | Dataset | Matrix | Format | ASAP | Actions |
|---|---|---|---|---|---|
|
broad_scp
sc
|
SCP2046
Mus musculus
|
7'758 cells x 16'225 genes |
rds
835 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
3e55180c-780a-4424-9434-5296640ffc0d
Homo sapiens
|
7'774 cells x 32'397 genes |
h5ad
71.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
8640d9f0-ca44-4158-b13b-0e84a82b5b29
Danio rerio
|
7'777 cells x 32'031 genes |
h5ad
10.5 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-121619
Arabidopsis thaliana
|
7'777 cells |
h5ad
213 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
20d87640-4be8-487f-93d4-dce38378d00f
Homo sapiens
|
7'803 cells x 32'088 genes |
h5ad
42 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
b6203114-e133-458a-aed5-eed1028378b4
Homo sapiens
|
7'805 cells x 21'506 genes |
h5ad
105 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
45d3098d-7b2b-48a9-9a78-c27f52bd14d8
Mus musculus
|
7'846 cells x 27'368 genes |
h5ad
27.8 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-GEOD-153723
Drosophila melanogaster
|
7'851 cells |
h5ad
212 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP280
|
7'871 cells x 27'877 genes |
counts_table
61.6 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
c8d5ec85-b174-449e-a3bc-2b8cd84c13c5
Mus musculus
|
7'871 cells x 29'286 genes |
h5ad
19.7 MB
|
Not in ASAP | Details |
|
hca
sc
|
a83b7f45-bfb1-4c6a-97e9-8e3370065cc1::e336a118-d7ab-4c8f-898b-d7a5fa81c2dd
Homo sapiens
|
7'926 cells |
h5
30.7 MB
|
Not in ASAP | Details |
|
broad_scp
sc
|
SCP2293
Mus musculus
|
7'949 cells x 20'250 genes |
counts_table
209 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-CURD-117
Mus musculus
|
7'966 cells |
h5ad
187 MB
|
Not in ASAP | Details |
|
ebi_sc
sc
|
E-MTAB-9061
Mus musculus
|
7'970 cells |
h5ad
186 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1a0610d8-1339-479b-b261-7fb586c3dab9
Mus musculus
|
7'976 cells x 17'943 genes |
h5ad
100 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
83b5e943-a1d5-4164-b3f2-f7a37f01b524
Homo sapiens
|
7'999 cells x 3'833 genes |
h5ad
136 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d224c8e0-c28e-4360-9e42-b3977cd83f9f
Homo sapiens
|
8'030 cells x 24'540 genes |
h5ad
317 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
50dc91a1-36b6-472a-b884-7307b6961ab1
Homo sapiens
|
8'041 cells x 58'232 genes |
h5ad
53.1 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
dbee77b2-4837-49db-9426-fbe03cea93cd
Mus musculus
|
8'043 cells x 29'286 genes |
h5ad
20.2 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d5452b83-7c3d-4d7c-ab7a-c7fece7196c5
Homo sapiens
|
8'077 cells x 58'232 genes |
h5ad
106 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
1637e817-d091-4793-a3af-796ef57e2668
Homo sapiens
|
8'086 cells x 15'885 genes |
h5ad
25.5 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
d5a2d011-3765-4dad-ac36-3fff087589fe
Homo sapiens
|
8'093 cells x 18'736 genes |
h5ad
695 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
ea7b95cf-1967-4431-9ee8-ec85ff793360
Homo sapiens
|
8'102 cells x 58'226 genes |
h5ad
67.3 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
024581e3-5375-4e33-8060-d8448694f556
Homo sapiens
|
8'156 cells x 14'731 genes |
h5ad
98.8 MB
|
Not in ASAP | Details |
|
cellxgene
sc
|
63d02cfd-0580-415d-8b34-ff4839af89e3
Callithrix jacchus
|
8'166 cells x 14'409 genes |
h5ad
71.4 MB
|
Not in ASAP | Details |